Protein Concepts Dictionary

Tableau information

Concept source:  d1n60b1  amino acid (a.a.) range (ASP43)(GLU141)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP43)   (PRO47) E1
	   (GLY48)   (HIS59) E2
	   (LYS65)   (THR69) E3
	   (THR69)   (LEU75) H4
	   (PHE79)   (ALA84) E5
	   (ALA84)   (ASN91) H6
	   (HIS93)   (LEU98) E7
	  (ASP101)  (LEU106) E8
	  (VAL118)  (LYS124) E9
	  (ARG126)  (VAL136) H10
	  (VAL136)  (GLU141) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      118.6°   E2                                                                    
E3      -69.6°  154.3°   E3                                                             
H4      -72.8°  161.1°  -10.4°   H4                                                      
E5      111.0°  -40.2° -164.2°  153.9°   E5                                               
H6       80.5° -104.0° -101.3°  -92.4°  -63.9°   H6                                        
E7      138.4°  -86.9°  102.0°   93.1°  -66.5°   60.8°   E7                                 
E8      -59.2°  106.9°   54.3°   64.6° -140.5°  137.4°  148.2°   E8                          
E9      -67.9°  153.7°   -2.2°   12.2°  165.6°  102.2°  104.3°  -52.3°   E9                   
H10      86.5°  -32.1°  144.9°  154.1°  -48.9°  -99.6° -112.8°   91.6°  142.7°   H10           
E11     111.4°  -23.2°  177.5° -171.4°  -18.1°  -81.1°  -78.7°  124.0° -176.3°  -34.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1n60e1 :    (ASP43)  (GLU141)   [view usage] : d.41.1.1 |alpha/beta-Hammerhead |CO dehydrogenase molybdoprotein N-domain-like |CO dehydrogenase molybdoprotein N-domain-like |Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain |Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
 d1n63b1 :    (ASP43)  (GLU141)   [view usage] : d.41.1.1 |alpha/beta-Hammerhead |CO dehydrogenase molybdoprotein N-domain-like |CO dehydrogenase molybdoprotein N-domain-like |Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain |Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
 d1n60b1 :    (ASP43)  (GLU141)   [view usage] : d.41.1.1 |alpha/beta-Hammerhead |CO dehydrogenase molybdoprotein N-domain-like |CO dehydrogenase molybdoprotein N-domain-like |Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain |Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
 d1n5we1 :    (ASP43)  (GLU141)   [view usage] : d.41.1.1 |alpha/beta-Hammerhead |CO dehydrogenase molybdoprotein N-domain-like |CO dehydrogenase molybdoprotein N-domain-like |Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain |Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]
 d1ffub1 :    (ASP40)  (TYR137)   [view usage] : d.41.1.1 |alpha/beta-Hammerhead |CO dehydrogenase molybdoprotein N-domain-like |CO dehydrogenase molybdoprotein N-domain-like |Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain |Hydrogenophaga pseudoflava [TaxId: 47421]
 d1n5wb1 :    (ASP43)  (GLU141)   [view usage] : d.41.1.1 |alpha/beta-Hammerhead |CO dehydrogenase molybdoprotein N-domain-like |CO dehydrogenase molybdoprotein N-domain-like |Carbon monoxide (CO) dehydrogenase molybdoprotein, N-domain |Oligotropha carboxidovorans, formerly Pseudomonas carboxydovorans [TaxId: 40137]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.41