Protein Concepts Dictionary

Tableau information

Concept source:  d2xy3d_  amino acid (a.a.) range (ASP22)(ALA119)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP22)   (ALA28) E1
	   (ASP31)   (LYS35) E2
	   (PHE39)   (GLY45) E3
	   (GLY45)   (GLU49) E4
	   (GLY53)   (VAL59) E5
	   (THR64)   (GLY69) H6
	   (MET76)   (ASP80) E7
	   (ASP80)   (ASP86) H8
	   (PHE89)   (TYR95) E9
	   (ASP99)  (LYS104) E10
	  (CYS109)  (ALA119) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2       78.5°   E2                                                                    
E3      111.0° -170.5°   E3                                                             
E4     -138.9° -107.4°   66.0°   E4                                                      
E5      -63.4°  -58.3°  124.9°  154.3°   E5                                               
H6       -6.3°  -80.2°  109.1° -144.3°  -59.0°   H6                                        
E7       97.4°  133.1°  -48.1°  -48.2°  157.3°  100.7°   E7                                 
H8       45.6°  123.5°  -65.9° -119.5°   85.0°   43.2°  -72.5°   H8                          
E9      -78.5°  -26.5°  152.0°  124.5°  -34.6°  -77.3°  159.5°  115.2°   E9                   
E10    -108.4°  167.1°   11.3°   60.1°  134.5°  107.9°  -36.8°  -65.6°  163.3°   E10           
E11     120.7°   84.8°  -90.4°  -27.1°  142.1° -127.1°  -57.0° -126.2°  107.6°  -82.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2baza_ :    (ILE24)  (ALA119)   [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d2xy3d_ :    (ASP22)  (ALA119)   [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d4aoza_ :    (ILE26)  (ALA121)   [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d4ao5b_ :    (ILE24)  (ALA119)   [view usage] : b.85.4.0 |beta-clip |dUTPase-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.85