Protein Concepts Dictionary

Tableau information

Concept source:  d2v9xa_  amino acid (a.a.) range (GLU72)(PRO162)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU72)   (GLU77) E1
	   (GLY78)   (HIS84) E2
	   (ALA89)   (GLU95) E3
	   (GLU95)  (ALA101) E4
	  (VAL104)  (GLY109) E5
	  (ARG110)  (GLY117) H6
	  (GLY117)  (HIS121) E7
	  (HIS125)  (GLY130) E8
	  (CYS134)  (GLY143) E9
	  (LEU145)  (PRO151) E10
	  (ALA157)  (PRO162) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2     -130.0°   E2                                                                    
E3      -59.4° -136.7°   E3                                                             
E4      124.6°   69.4°   73.6°   E4                                                      
E5       61.8°  -85.5°  121.1°  150.9°   E5                                               
H6      114.2°  -44.9°  173.3° -110.9°   52.6°   H6                                        
E7     -125.7°   98.6°  -69.0°  -45.5°  159.2° -117.7°   E7                                 
E8     -103.1°  118.7°  -47.7°  -54.8°  154.1°  138.9°   22.6°   E8                          
E9       80.6°  -55.1°  132.7°  117.9°  -33.1°   40.9°  153.1°  172.7°   E9                   
E10     -80.6°  144.8°   37.4°   78.8°  128.9° -147.1°  -46.7°  -26.1°  160.0°   E10           
E11    -119.5°   81.9°  -63.7°   13.0°  163.1° -121.5°  -35.8°  -42.0°  130.7°  -65.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1xs4a_ :    (GLU72)  (PRO162)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]
 d2qxxa_ :    (LEU60)  (ARG153)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
 d2v9xl_ :    (GLU72)  (PRO162)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]
 d1xs6a_ :    (GLU72)  (PRO162)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]
 d2qlpa_ :    (LEU60)  (ARG153)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
 d2qlpd_ :    (SER62)  (ARG153)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
 d2j4qb_ :    (ASP71)  (PRO162)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]
 d2qlpb_ :    (LEU63)  (ARG153)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
 d1xs1a_ :    (GLU72)  (PRO162)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]
 d4a6ab_ :    (LEU60)  (ARG153)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
 d4a6aa_ :    (LEU60)  (ARG153)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
 d2v9xa_ :    (GLU72)  (PRO162)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]
 d2qlpf_ :    (LEU60)  (ARG153)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Mycobacterium tuberculosis [TaxId: 83332]
 d2j4qa_ :    (ASP71)  (PRO162)   [view usage] : b.85.4.1 |beta-clip |dUTPase-like |dUTPase-like |Deoxycytidine triphosphate deaminase (dCTP deaminase) |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.85