Protein Concepts Dictionary

Tableau information

Concept source:  d1bncb1  amino acid (a.a.) range (GLY332)(GLY445)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY332)  (ARG338) E1
	  (LEU348)  (GLY352) E2
	  (THR355)  (PHE363) E3
	  (GLY364)  (SER369) E4
	  (GLY374)  (TYR380) E5
	  (ILE385)  (GLU393) E6
	  (ARG395)  (LEU409) H7
	  (LEU409)  (GLY413) E8
	  (VAL418)  (ASP427) H9
	  (ASP427)  (GLY433) H10
	  (TYR439)  (GLY445) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      -83.4°   E2                                                                    
E3      172.3° -103.8°   E3                                                             
E4      -25.0°  -78.5° -153.0°   E4                                                      
E5      -72.1° -137.8°  100.4°   64.7°   E5                                               
E6      163.2°  103.1°   17.9°  170.9° -110.2°   E6                                        
H7      -34.2°   52.6°  153.5°  -45.0° -105.7°  142.6°   H7                                 
E8       -5.8°   80.3° -171.5°   19.7°  -72.1° -168.9°  -33.6°   E8                          
H9      144.6° -128.1°   30.3°  152.7°   88.2°  -25.1° -153.2° -149.4°   H9                   
H10     142.2°  -88.3°  -37.3°  117.2°   90.7°  -54.2°  136.4°  136.8°  -64.2°   H10           
H11     -51.4°   88.2°  130.5°  -76.1° -101.6°  112.8°  -48.0°  -56.4°  107.5°  165.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3g8ca3 :   (GLY332)  (LEU444)   [view usage] : b.84.2.0 |Barrel-sandwich hybrid |Rudiment single hybrid motif |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2dzda3 :   (GLY342)  (PHE459)   [view usage] : b.84.2.0 |Barrel-sandwich hybrid |Rudiment single hybrid motif |automated matches |automated matches |Geobacillus thermodenitrificans [TaxId: 33940]
 d1ulza1 :   (GLY331)  (PHE447)   [view usage] : b.84.2.1 |Barrel-sandwich hybrid |Rudiment single hybrid motif |BC C-terminal domain-like |Biotin carboxylase (BC), C-domain |Aquifex aeolicus [TaxId: 63363]
 d1bnca1 :   (GLY332)  (GLY445)   [view usage] : b.84.2.1 |Barrel-sandwich hybrid |Rudiment single hybrid motif |BC C-terminal domain-like |Biotin carboxylase (BC), C-domain |Escherichia coli [TaxId: 562]
 d3jzfa2 :   (GLY332)  (LEU444)   [view usage] : b.84.2.1 |Barrel-sandwich hybrid |Rudiment single hybrid motif |BC C-terminal domain-like |Biotin carboxylase (BC), C-domain |Escherichia coli [TaxId: 562]
 d2c00a3 :   (GLY332)  (GLY445)   [view usage] : b.84.2.0 |Barrel-sandwich hybrid |Rudiment single hybrid motif |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d2v59a3 :   (GLY332)  (GLY445)   [view usage] : b.84.2.1 |Barrel-sandwich hybrid |Rudiment single hybrid motif |BC C-terminal domain-like |Biotin carboxylase (BC), C-domain |Escherichia coli [TaxId: 562]
 d1bncb1 :   (GLY332)  (GLY445)   [view usage] : b.84.2.1 |Barrel-sandwich hybrid |Rudiment single hybrid motif |BC C-terminal domain-like |Biotin carboxylase (BC), C-domain |Escherichia coli [TaxId: 562]
 d2gpwa1 :   (GLY332)  (LEU444)   [view usage] : b.84.2.1 |Barrel-sandwich hybrid |Rudiment single hybrid motif |BC C-terminal domain-like |Biotin carboxylase (BC), C-domain |Escherichia coli [TaxId: 562]
 d1dv2a1 :   (GLY332)  (GLY445)   [view usage] : b.84.2.1 |Barrel-sandwich hybrid |Rudiment single hybrid motif |BC C-terminal domain-like |Biotin carboxylase (BC), C-domain |Escherichia coli [TaxId: 562]
 d2vqda3 :   (GLY332)  (GLY445)   [view usage] : b.84.2.0 |Barrel-sandwich hybrid |Rudiment single hybrid motif |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.84