Protein Concepts Dictionary

Tableau information

Concept source:  d3ap4d_  amino acid (a.a.) range (PRO18)(TYR141)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO18)   (THR22) E1
	   (THR31)   (GLY37) E2
	   (ARG45)   (LEU50) E3
	   (ALA63)   (PRO68) E4
	   (ALA73)   (ASN83) E5
	   (GLU84)   (ASP94) E6
	  (PHE103)  (VAL109) E7
	  (LYS113)  (ASN119) E8
	  (LEU124)  (HIS128) E9
	  (GLY131)  (THR137) H10
	  (THR137)  (TYR141) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      156.8°   E2                                                                    
E3      -10.3°  155.5°   E3                                                             
E4      145.2°  -30.8°  154.4°   E4                                                      
E5      -49.2°  132.5°  -39.1°  163.2°   E5                                               
E6      107.8°  -69.1°  118.0°  -39.4°  156.9°   E6                                        
E7      -32.8°  165.6°  -29.2°  158.5°  -36.7°  123.5°   E7                                 
E8      129.4°  -33.4°  135.4°  -24.4°  148.9°  -43.8°  160.8°   E8                          
E9      -49.5°  134.7°  -39.8°  164.6°   -4.8°  155.9°  -33.5°  153.6°   E9                   
H10    -123.9°   36.1° -119.8°  -61.7°  104.1°  -91.4° -139.8°  -47.6°  108.0°   H10           
E11     172.3°  -22.8°  177.2°  -27.4°  138.5°  -64.4°  151.1°  -45.2°  138.1°   58.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3i8ta_ :    (PRO30)  (GLY152)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d2dyca_ :    (PRO18)  (GLY140)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3gala_ :     (HIS5)  (GLY124)   [view usage] : b.29.1.3 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Galectin (animal S-lectin) |Galectin-7 |Human (Homo sapiens) [TaxId: 9606]
 d1bkza_ :     (HIS5)  (GLY124)   [view usage] : b.29.1.3 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Galectin (animal S-lectin) |Galectin-7 |Human (Homo sapiens) [TaxId: 9606]
 d2zhna_ :    (PHE17)  (GLY138)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ojba_ :    (PRO10)  (ASN130)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2jj6b_ :     (PRO2)  (ASN126)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3nv1a_ :   (PRO194)  (GLY313)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2eala_ :    (PHE17)  (GLY138)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4hl0a1 :    (TYR11)  (ASP131)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Toxascaris leonina [TaxId: 59264]
 d3b9ca_ :     (PRO3)  (GLY128)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2jj6a_ :     (PHE3)  (GLY127)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2d6nb_ :    (PHE17)  (SER136)   [view usage] : b.29.1.0 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29