Protein Concepts Dictionary

Tableau information

Concept source:  d1fgya_  amino acid (a.a.) range (LEU271)(ASP382)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU271)  (GLY275) E1
	  (LYS279)  (ARG283) E2
	  (TRP285)  (THR289) E3
	  (CYS292)  (GLU297) E4
	  (ARG305)  (GLU311) E5
	  (ASN312)  (GLU317) E6
	  (ASN325)  (ASN331) E7
	  (ALA341)  (ALA346) E8
	  (VAL350)  (VAL356) E9
	  (VAL356)  (ALA362) E10
	  (SER364)  (ASP382) H11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      154.6°   E2                                                                    
E3       98.0°  -87.5°   E3                                                             
E4      -85.5°   81.8°  161.0°   E4                                                      
E5       96.0° -102.7°  -36.2°  162.4°   E5                                               
E6      109.0°  -82.5° -136.3°   57.8° -105.6°   E6                                        
E7      -54.4°  119.4°   46.5° -127.7°   65.1°  157.0°   E7                                 
E8      -80.0°   81.1°  143.8°  -18.5° -176.0°  -76.1° -112.0°   E8                          
E9       89.2° -115.3°  -94.0°  104.7°  -57.8°   54.1° -106.3°  121.9°   E9                   
E10     147.8°  -37.4° -114.1°   64.8° -108.6°  -45.1°  156.1°   75.2°   86.8°   E10           
H11     -74.7°  102.0°   28.0°  140.7°  -55.7° -161.2°   20.3°  122.5° -108.5°  136.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1fgya_ :   (LEU271)  (ASP382)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Grp1 |Mouse (Mus musculus) [TaxId: 10090]
 d1fhxa_ :   (LEU271)  (ASP382)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Grp1 |Mouse (Mus musculus) [TaxId: 10090]
 d4kaxb_ :   (LEU271)  (SER378)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1u2ba1 :   (LEU271)  (ASP383)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Cytohesin 3 |Mouse (Mus musculus) [TaxId: 10090]
 d1fhxb_ :   (LEU271)  (ILE379)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Grp1 |Mouse (Mus musculus) [TaxId: 10090]
 d2r09a2 :   (LEU271)  (ARG381)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Grp1 |Mouse (Mus musculus) [TaxId: 10090]
 d1fhwb_ :   (LEU271)  (ASP382)   [view usage] : b.55.1.1 |PH domain-like barrel |PH domain-like |Pleckstrin-homology domain (PH domain) |Grp1 |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.55