Protein Concepts Dictionary

Tableau information

Concept source:  d1rj7i_  amino acid (a.a.) range (VAL283)(GLY386)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL283)  (ARG289) E1
	  (GLY291)  (VAL297) E2
	  (PHE302)  (GLU308) E3
	  (TYR310)  (PHE314) E4
	  (ASP316)  (VAL322) E5
	  (PHE329)  (SER335) E6
	  (TYR343)  (VAL351) E7
	  (CYS352)  (ALA356) E8
	  (ARG357)  (HIS366) E9
	  (ILE369)  (SER374) E10
	  (PHE380)  (GLY386) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2      156.5°   E2                                                                    
E3      -31.9°  170.7°   E3                                                             
E4       56.3° -113.2°   75.1°   E4                                                      
E5      130.7°  -30.3°  150.5°  117.0°   E5                                               
E6      -54.0°  149.1°  -25.2°  -78.6°  164.2°   E6                                        
E7      140.1°  -18.4°  170.9°   96.3°  -32.3°  156.9°   E7                                 
E8       83.1°  -78.6°  104.4°  101.6°  -48.5° -128.7°  -74.3°   E8                          
E9      -44.0°  153.5°  -27.3°  -59.0°  174.2°  -19.6°  148.2°  126.7°   E9                   
E10    -122.3°   66.3°  105.8°  175.4°  -60.1°  104.2°  -82.6°  -73.8°  123.6°   E10           
E11     156.8°   -4.3°  171.2° -110.0°  -34.0°  147.1°  -17.0°  -81.9°  149.6°   69.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1rj7a_ :   (VAL283)  (GLY386)   [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Ectodysplasin A, Eda-a1 |Human (Homo sapiens) [TaxId: 9606]
 d1rj7i_ :   (VAL283)  (GLY386)   [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Ectodysplasin A, Eda-a1 |Human (Homo sapiens) [TaxId: 9606]
 d1rj7k_ :   (VAL283)  (GLY386)   [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Ectodysplasin A, Eda-a1 |Human (Homo sapiens) [TaxId: 9606]
 d1rj7h_ :   (VAL283)  (GLY386)   [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Ectodysplasin A, Eda-a1 |Human (Homo sapiens) [TaxId: 9606]
 d1rj7l_ :   (VAL283)  (GLY386)   [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Ectodysplasin A, Eda-a1 |Human (Homo sapiens) [TaxId: 9606]
 d1rj7j_ :   (VAL283)  (GLY386)   [view usage] : b.22.1.1 |TNF-like |TNF-like |TNF-like |Ectodysplasin A, Eda-a1 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.22