Protein Concepts Dictionary

Tableau information

Concept source:  d1ehlh1  amino acid (a.a.) range (VAL2)(SER112)

nSSEs in this Concept: 11

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (VAL2)    (SER7) E1
	    (THR9)   (ARG13) E2
	   (ALA16)   (GLY26) E3
	   (HIS35)   (ARG40) E4
	   (GLY44)   (PRO52) E5
	   (ASN54)   (ASN60) E6
	   (LYS66)   (VAL72) E7
	   (ALA78)   (SER82) E8
	   (ALA88)   (TYR98) E9
	  (ASP101)  (GLN105) E10
	  (GLY106)  (SER112) E11

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                           
E2       36.8°   E2                                                                    
E3      156.0° -162.1°   E3                                                             
E4      -44.7°  -63.7°  133.6°   E4                                                      
E5      108.7°   99.9°  -66.2°  152.3°   E5                                               
E6      -67.8°  -66.2°  124.5°  -32.5°  161.8°   E6                                        
E7      124.7°  135.1°  -37.0°  142.1°  -38.4°  158.2°   E7                                 
E8      -29.2°  -23.8°  170.8°  -40.1°  122.4°  -46.4°  151.8°   E8                          
E9      160.5°  129.3°  -33.6°  152.9°  -54.7°  124.3°  -50.3°  146.8°   E9                   
E10     -28.2°  -64.8°  128.5°  -47.1°  106.6°  -78.8°  105.0°  -54.6°  155.3°   E10           
E11      16.5°  -24.1°  172.2°  -43.1°  114.3°  -57.4°  138.8°  -13.3°  153.4°  -43.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3qi9d1 :     (GLY1)  (GLU118)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4p48a2 :   (LEU130)  (VAL250)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
 d1yyll1 :     (ASP1)  (ILE106)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Human (Homo sapiens), cluster 3.2 [TaxId: 9606]
 d3b9kb_ :     (LEU1)  (VAL114)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |CD8 |Mouse (Mus musculus), beta-chain [TaxId: 10090]
 d2eyrb1 :     (ASP3)  (GLU118)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1kj2a_ :     (GLN2)  (PRO116)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Mouse (Mus musculus), alpha-chain [TaxId: 10090]
 d1g6rb1 :     (ALA3)  (GLU117)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Mouse (Mus musculus), beta-chain [TaxId: 10090]
 d1ehlh1 :     (VAL2)  (SER112)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
 d3u7yl1 :     (VAL3)  (VAL100)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1namb_ :     (LEU3)  (VAL116)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Mouse (Mus musculus), beta-chain [TaxId: 10090]
 d1a3rh1 :     (VAL2)  (SER112)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]
 d1a6uh_ :   (VAL302)  (SER419)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
 d1fo0b_ :     (LEU3)  (VAL116)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Mouse (Mus musculus), beta-chain [TaxId: 10090]
 d1ac6a_ :     (ASP1)  (PRO112)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Mouse (Mus musculus), alpha-chain [TaxId: 10090]
 d1bqhh_ :     (PRO2)  (GLN120)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |CD8 |Mouse (Mus musculus) [TaxId: 10090]
 d1g6ra1 :     (GLN1)  (TYR117)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Mouse (Mus musculus), alpha-chain [TaxId: 10090]
 d2eysb1 :     (ASP3)  (GLU118)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1tpxc1 :     (ASP1)  (LYS107)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 4 [TaxId: 10090]
 d2vyrg_ :     (VAL2)  (SER123)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1pskl1 :     (GLN1)  (ILE105)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
 d1bwma1 :   (GLN302)  (VAL414)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Mouse (Mus musculus), alpha-chain [TaxId: 10090]
 d1cgsh1 :     (ARG1)  (SER115)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
 d1dqta_ :     (ILE1)  (PRO117)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoreceptor CTLA-4 (CD152), N-terminal fragment |Mouse (Mus musculus) [TaxId: 10090]
 d1nqba2 :   (ASP121)  (ILE231)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]
 d2hvja1 :     (GLN3)  (SER117)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
 d1nqba1 :     (VAL2)  (SER119)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
 d4jkpl1 :     (VAL3)  (ASP101)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2bx5a_ :     (ASP1)  (ILE106)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1kb5b_ :     (LEU3)  (THR115)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |T-cell antigen receptor |Mouse (Mus musculus), beta-chain [TaxId: 10090]
 d1cu4h1 :     (LYS3)  (SER109)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.1 [TaxId: 10090]
 d4ms8c1 :     (SER2)  (ASN114)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1k4ca1 :     (GLN3)  (SER117)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin heavy chain variable domain, VH |Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]
 d1rmfl1 :     (ASP1)  (ILE111)   [view usage] : b.1.1.1 |Immunoglobulin-like beta-sandwich |Immunoglobulin |V set domains (antibody variable domain-like) |Immunoglobulin light chain kappa variable domain, VL-kappa |Mouse (Mus musculus), cluster 1.1 [TaxId: 10090]
 d2xnab1 :     (GLY5)  (GLU115)   [view usage] : b.1.1.0 |Immunoglobulin-like beta-sandwich |Immunoglobulin |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   b.1