Tableau information
Concept source: d2qa0a_ amino acid (a.a.) range (PRO593)(LEU738)
nSSEs in this Concept: 11
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO593) (ASN599) E1
(ASN599) (ALA603) E2
(GLY606) (LEU616) E3
(ILE620) (HIS626) E4
(GLY639) (LYS643) E5
(PRO647) (ASN653) E6
(THR654) (ASP659) E7
(THR674) (GLU686) E8
(GLU688) (SER694) E9
(ARG727) (THR731) E10
(LEU734) (LEU738) E11
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -76.2° E2
E3 -26.1° -100.5° E3
E4 111.8° -72.8° 129.3° E4
E5 82.6° -45.6° 106.4° -34.5° E5
E6 35.0° -106.1° 27.9° -103.9° -90.6° E6
E7 46.4° -106.1° 44.7° -87.8° -79.7° 16.8° E7
E8 -126.1° 66.4° -131.2° 93.0° 96.4° 158.7° 171.7° E8
E9 -134.0° 109.4° -116.0° 113.3° 135.0° -134.3° -142.6° -43.7° E9
E10 112.6° 36.5° 135.6° -62.1° 56.6° 141.0° -135.3° 39.9° 81.9° E10
E11 146.9° 79.2° 167.5° 38.4° 64.4° -139.9° -123.2° 60.3° 75.4° 47.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1vu0a_ : (PRO591) (LEU736) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |automated matches |Adeno-associated virus - 6 [TaxId: 68558]
d3ux1a_ : (GLY578) (ASN735) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |automated matches |Adeno-associated virus 9 [TaxId: 235455]
d3kica_ : (GLY578) (LEU736) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |automated matches |Adeno-associated virus 3b [TaxId: 68742]
d1lp3a_ : (ALA453) (LEU598) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |Dependovirus capsid protein |Adeno-associated virus, aav-2 [TaxId: 272636]
d3oaha_ : (PRO591) (THR729) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |automated matches |Adeno-associated virus - 6 [TaxId: 68558]
d3shma_ : (PRO591) (PRO735) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |automated matches |Adeno-associated virus - 6 [TaxId: 68558]
d2qa0a_ : (PRO593) (LEU738) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |automated matches |Adeno-associated virus - 8 [TaxId: 202813]
d3ng9a_ : (PRO591) (LEU736) [view usage] : b.121.5.2 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |ssDNA viruses |Parvoviridae-like VP |automated matches |Adeno-associated virus - 1 [TaxId: 85106]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.121