Tableau information
Concept source: d2ymua2 amino acid (a.a.) range (GLN398)(GLY506)
nSSEs in this Concept: 11
String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN398) (SER404) E1
(LYS407) (ASN413) E2
(LEU419) (GLY424) E3
(TRP430) (PHE434) E4
(GLN439) (SER445) E5
(LYS448) (ASN454) E6
(LEU460) (GLY465) E7
(ARG471) (PHE475) E8
(GLN480) (SER486) E9
(LYS489) (ASN495) E10
(LEU501) (GLY506) E11
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 162.2° E2
E3 -34.9° 162.6° E3
E4 157.6° -40.2° 123.3° E4
E5 -18.6° 145.9° -48.7° 167.7° E5
E6 155.8° -31.1° 139.6° -28.7° 163.6° E6
E7 -42.4° 138.3° -42.0° 131.3° -36.5° 159.6° E7
E8 149.5° -48.2° 114.7° -10.6° 157.2° -39.2° 121.0° E8
E9 -32.2° 130.6° -64.9° 168.7° -16.3° 149.7° -47.9° 165.4° E9
E10 136.3° -57.8° 110.3° -28.1° 154.9° -29.5° 140.5° -32.7° 161.8° E10
E11 -60.6° 107.7° -80.9° 133.6° -42.4° 138.5° -42.4° 129.9° -36.2° 161.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2b5la4 : (SER506) (THR630) [view usage] : b.69.4.3 |7-bladed beta-propeller |WD40 repeat-like |DDB1-like |DDB1 |Human (Homo sapiens) [TaxId: 9606]
d1iuba_ : (ASN129) (ASP253) [view usage] : b.68.8.1 |6-bladed beta-propeller |Fucose-specific lectin |Fucose-specific lectin |Fucose-specific lectin |Orange peel mushroom (Aleuria aurantia) [TaxId: 5188]
d1c5ka1 : (ARG165) (GLN283) [view usage] : b.68.4.1 |6-bladed beta-propeller |TolB, C-terminal domain |TolB, C-terminal domain |TolB, C-terminal domain |Escherichia coli [TaxId: 562]
d2dsoe_ : (GLY56) (PRO176) [view usage] : b.68.6.1 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |SGL-like |automated matches |Staphylococcus aureus [TaxId: 1280]
d1qksa2 : (LEU168) (ARG285) [view usage] : b.70.2.1 |8-bladed beta-propeller |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |Paracoccus denitrificans [TaxId: 266]
d1crza1 : (SER191) (THR307) [view usage] : b.68.4.1 |6-bladed beta-propeller |TolB, C-terminal domain |TolB, C-terminal domain |TolB, C-terminal domain |Escherichia coli [TaxId: 562]
d2bkla1 : (LYS239) (PRO360) [view usage] : b.69.7.0 |7-bladed beta-propeller |Peptidase/esterase 'gauge' domain |automated matches |automated matches |Myxococcus xanthus [TaxId: 34]
d2xzmr_ : (PRO40) (SER176) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d2xzmr_ : (TYR186) (ILE294) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d3vi3a1 : (ASP247) (PRO404) [view usage] : b.69.8.0 |7-bladed beta-propeller |Integrin alpha N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4um8a1 : (ASP238) (GLY393) [view usage] : b.69.8.1 |7-bladed beta-propeller |Integrin alpha N-terminal domain |Integrin alpha N-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hzua2 : (LEU150) (ARG267) [view usage] : b.70.2.1 |8-bladed beta-propeller |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase |Pseudomonas aeruginosa [TaxId: 287]
d1ofza_ : (ASN129) (ASP253) [view usage] : b.68.8.1 |6-bladed beta-propeller |Fucose-specific lectin |Fucose-specific lectin |Fucose-specific lectin |Orange peel mushroom (Aleuria aurantia) [TaxId: 5188]
d1q7fb_ : (ASN792) (SER911) [view usage] : b.68.9.1 |6-bladed beta-propeller |NHL repeat |NHL repeat |Brain tumor cg10719-pa |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1c9ia2 : (LYS163) (ARG297) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2w8ba2 : (ARG164) (THR284) [view usage] : b.68.4.1 |6-bladed beta-propeller |TolB, C-terminal domain |TolB, C-terminal domain |automated matches |Escherichia coli [TaxId: 562]
d1q7fa_ : (ASN792) (SER911) [view usage] : b.68.9.1 |6-bladed beta-propeller |NHL repeat |NHL repeat |Brain tumor cg10719-pa |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2dsod_ : (PHE148) (PRO272) [view usage] : b.68.6.1 |6-bladed beta-propeller |Calcium-dependent phosphotriesterase |SGL-like |automated matches |Staphylococcus aureus [TaxId: 1280]
d1bpoa2 : (LYS163) (ARG297) [view usage] : b.69.6.1 |7-bladed beta-propeller |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Clathrin heavy-chain terminal domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2cnxa_ : (GLU58) (HIS170) [view usage] : b.69.4.0 |7-bladed beta-propeller |WD40 repeat-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mdah_ : (ARG33) (ALA165) [view usage] : b.69.2.1 |7-bladed beta-propeller |YVTN repeat-like/Quinoprotein amine dehydrogenase |Methylamine dehydrogenase, H-chain |Methylamine dehydrogenase, H-chain |Paracoccus denitrificans [TaxId: 266]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.68, b.70, b.69, i.1