Protein Concepts Dictionary

Tableau information

Concept source:  d1r8qe_  amino acid (a.a.) range (LEU59)(GLU241)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU59)   (MET74) H1
	   (PRO76)   (GLU87) H2
	   (THR92)  (GLY103) H3
	  (LYS108)  (GLY116) H4
	  (GLU119)  (HIS133) H5
	  (ASN139)  (PHE151) H6
	  (ALA157)  (CYS174) H7
	  (THR182)  (ASN201) H8
	  (LEU210)  (ARG218) H9
	  (GLU229)  (GLU241) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2     -156.5°   H2                                                             
H3      -85.5°  118.0°   H3                                                      
H4       66.7°  -89.8° -150.5°   H4                                               
H5     -107.5°   85.7°  -57.1° -120.6°   H5                                        
H6     -112.0°   70.4°   95.2°  104.0°  129.1°   H6                                 
H7     -120.8°   59.2°  -94.2°   91.9°  -37.6°  126.9°   H7                          
H8      -76.1°  123.9°   35.2° -135.9°   92.1°  -68.4°  128.4°   H8                   
H9       92.1°  -64.4° -173.4°   25.7° -118.2°   91.4°  -81.8°  149.7°   H9            
H10    -106.1°   89.4°   58.6° -136.9°  102.2°  -36.6°  123.7°  -36.5°  128.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1r8se_ :    (LYS64)  (GLU241)   [view usage] : a.118.3.1 |alpha-alpha superhelix |Sec7 domain |Sec7 domain |Exchange factor ARNO |Human (Homo sapiens) [TaxId: 9606]
 d1r8qf_ :    (THR58)  (GLU241)   [view usage] : a.118.3.1 |alpha-alpha superhelix |Sec7 domain |Sec7 domain |Exchange factor ARNO |Human (Homo sapiens) [TaxId: 9606]
 d1xt0b_ :     (ALA8)  (LYS190)   [view usage] : a.118.3.1 |alpha-alpha superhelix |Sec7 domain |Sec7 domain |RalF, N-terminal domain |Legionella pneumophila [TaxId: 446]
 d4jwla_ :    (HIS54)  (ARG218)   [view usage] : a.118.3.0 |alpha-alpha superhelix |Sec7 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1r8qe_ :    (LEU59)  (GLU241)   [view usage] : a.118.3.1 |alpha-alpha superhelix |Sec7 domain |Sec7 domain |Exchange factor ARNO |Human (Homo sapiens) [TaxId: 9606]
 d3ltlb_ :   (GLU700)  (LYS881)   [view usage] : a.118.3.0 |alpha-alpha superhelix |Sec7 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4jmoa_ :    (MET55)  (ASN240)   [view usage] : a.118.3.0 |alpha-alpha superhelix |Sec7 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ku1a_ :    (MET-1)  (ASP753)   [view usage] : a.118.3.1 |alpha-alpha superhelix |Sec7 domain |Sec7 domain |ARF guanine-exchange factor 2, Gea2 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2r0da1 :    (GLN65)  (GLU246)   [view usage] : a.118.3.1 |alpha-alpha superhelix |Sec7 domain |Sec7 domain |Cytohesin-1/b2-1 |Mouse (Mus musculus) [TaxId: 10090]
 d2r09a1 :    (GLN65)  (ARG223)   [view usage] : a.118.3.1 |alpha-alpha superhelix |Sec7 domain |Sec7 domain |Cytohesin-1/b2-1 |Mouse (Mus musculus) [TaxId: 10090]
 d4l5ma_ :    (MET55)  (ASN240)   [view usage] : a.118.3.0 |alpha-alpha superhelix |Sec7 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.118