Tableau information
Concept source: d3omia_ amino acid (a.a.) range (PHE123)(SER402)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE123) (GLY129) H1
(PHE135) (ALA159) H2
(PRO176) (GLU182) H3
(TYR185) (LEU213) H4
(LEU227) (ASN258) H5
(VAL273) (LYS307) H6
(GLY312) (VAL330) H7
(VAL330) (MET335) H8
(SER341) (TRP371) H9
(THR379) (SER402) H10
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 157.5° H2
H3 -123.8° 77.9° H3
H4 -8.8° -161.4° -116.5° H4
H5 -147.2° 44.6° -61.9° -151.5° H5
H6 53.0° -121.8° 101.4° 46.7° -158.2° H6
H7 -141.1° 45.4° -71.8° -147.4° 10.1° 165.8° H7
H8 159.5° -5.6° 74.2° 161.0° -46.8° 117.9° -48.7° H8
H9 57.9° -121.4° 91.3° 50.5° -150.3° 10.2° -159.7° -116.8° H9
H10 -109.8° 62.2° 110.0° -118.4° 49.0° -148.2° 38.9° 67.7° -158.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3omia_ : (PHE123) (SER402) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d1qlea_ : (HIS85) (SER394) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Paracoccus denitrificans [TaxId: 266]
d3ehba_ : (GLY84) (SER394) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |automated matches |Paracoccus denitrificans [TaxId: 266]
d1ffta_ : (VAL126) (GLY395) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome O ubiquinol oxidase, subunit I |Escherichia coli [TaxId: 562]
d3dtua_ : (PHE123) (TRP371) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d1m56a_ : (HIS93) (GLN403) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
f.24