Protein Concepts Dictionary

Tableau information

Concept source:  d1ot8b_  amino acid (a.a.) range (PRO87)(GLU238)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO87)   (ALA93) H1
	   (ALA96)  (ASN106) H2
	  (THR120)  (ALA129) H3
	  (MET133)  (ASP141) H4
	  (THR153)  (VAL161) H5
	  (THR164)  (HIS174) H6
	  (THR186)  (GLU194) H7
	  (TYR197)  (PHE207) H8
	  (LEU219)  (LEU228) H9
	  (HIS230)  (GLU238) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2     -149.7°   H2                                                             
H3      -12.7° -160.0°   H3                                                      
H4      146.3°   -3.9° -157.2°   H4                                               
H5      -24.1° -170.4°  -12.0° -168.7°   H5                                        
H6      128.8°  -21.0° -139.8°  -17.6° -151.6°   H6                                 
H7      -44.1°  165.2°  -32.4°  169.1°  -20.4° -171.2°   H7                          
H8      111.1°  -38.7°  121.5°  -35.7° -133.2°  -18.4° -153.0°   H8                   
H9      -50.9°  159.1°  -39.5°  162.7°  -27.6° -177.4°   -7.3° -160.3°   H9            
H10     104.3°  -45.5°  115.1°  -42.2°  127.0°  -24.7°  147.2°   -7.4° -154.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2dzoa_ :    (THR74)  (ASN227)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4k5ca_ :    (LEU14)  (ALA182)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Escherichia coli [TaxId: 562]
 d4drxf_ :    (LEU14)  (LYS167)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Artificial gene [TaxId: 32630]
 d4hb5b_ :     (SER2)  (GLY159)   [view usage] : d.211.1.0 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |automated matches |automated matches |Artificial gene [TaxId: 32630]
 d2dzna_ :    (PHE76)  (VAL228)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4lnud_ :    (LEU14)  (ASN169)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Artificial gene [TaxId: 32630]
 d1mj0a_ :    (ASP13)  (GLN166)   [view usage] : k.37.1.1 |Artificial ankyrin repeat proteins |Artificial ankyrin repeat proteins |Artificial ankyrin repeat proteins |Sank e3_5 |Synthetic
 d3q9nd_ :    (ALA-3)  (LEU153)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Escherichia coli [TaxId: 562]
 d1ixva_ :    (PRO75)  (ASN227)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |26S proteasome non-ATPase regulatory subunit 10, gankyrin |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3so8a_ :    (SER11)  (ASN169)   [view usage] : d.211.1.0 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4hi9a_ :     (ILE4)  (GLY156)   [view usage] : d.211.1.0 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2kbxa_ :     (PHE5)  (GLY156)   [view usage] : d.211.1.0 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1wdya_ :    (ALA21)  (GLU177)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |RNase L, 2-5a-dependent ribonuclease |Human (Homo sapiens) [TaxId: 9606]
 d4hlla_ :    (ASP13)  (LEU165)   [view usage] : d.211.1.0 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d4f6rd_ :    (SER12)  (LEU165)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Artificial gene [TaxId: 32630]
 d4hi8a_ :     (ILE4)  (GLY156)   [view usage] : d.211.1.0 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4hb5a_ :     (SER2)  (LEU155)   [view usage] : d.211.1.0 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |automated matches |automated matches |Artificial gene [TaxId: 32630]
 d1svxa_ :    (SER12)  (GLN166)   [view usage] : k.37.1.1 |Artificial ankyrin repeat proteins |Artificial ankyrin repeat proteins |Artificial ankyrin repeat proteins |Off7 |Synthetic
 d1wg0a_ :    (PRO75)  (ASN227)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3q9nc_ :     (GLN0)  (LEU153)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Escherichia coli [TaxId: 562]
 d1mx6b_ :     (LEU9)  (GLY160)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |p18ink4C(ink6) |Human (Homo sapiens) [TaxId: 9606]
 d1mx4b_ :     (PRO4)  (GLY160)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |p18ink4C(ink6) |Human (Homo sapiens) [TaxId: 9606]
 d1ihbb_ :     (GLU8)  (GLY160)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |p18ink4C(ink6) |Human (Homo sapiens) [TaxId: 9606]
 d3f6qa_ :     (ILE4)  (GLY156)   [view usage] : d.211.1.0 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1mx2b_ :     (LEU9)  (GLY160)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |p18ink4C(ink6) |Human (Homo sapiens) [TaxId: 9606]
 d2qyja1 :    (LEU14)  (LEU165)   [view usage] : k.37.1.1 |Artificial ankyrin repeat proteins |Artificial ankyrin repeat proteins |Artificial ankyrin repeat proteins |Sank e3_5 |Synthetic construct [TaxId: 32630]
 d1awcb_ :     (LEU6)  (LEU156)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |GA bindinig protein (GABP) beta 1 |Mouse (Mus musculus) [TaxId: 10090]
 d4drxe_ :    (LEU14)  (LEU165)   [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |automated matches |Artificial gene [TaxId: 32630]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.211,    k.37