Protein Concepts Dictionary

Tableau information

Concept source:  d4p6rb_  amino acid (a.a.) range (ARG165)(ILE288)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG165)  (LYS173) H1
	  (SER189)  (GLY196) H2
	  (LEU203)  (GLY212) H3
	  (GLY213)  (VAL218) H4
	  (VAL218)  (ASP224) H5
	  (VAL226)  (ILE244) H6
	  (ASN261)  (ASP264) H7
	  (THR272)  (MET277) H8
	  (ASN278)  (GLY283) H9
	  (GLY283)  (ILE288) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2      168.1°   H2                                                             
H3     -153.1°  -15.3°   H3                                                      
H4       16.0° -155.2° -143.6°   H4                                               
H5     -120.9°   66.4°   72.7° -137.0°   H5                                        
H6      -41.1°  150.4°  165.7°  -48.9° -100.4°   H6                                 
H7     -129.2°   47.8°   42.4°  136.9°  -44.9° -139.0°   H7                          
H8     -113.9°   77.5°   90.3° -126.1°   34.0°  -77.8°   77.0°   H8                   
H9      109.5°  -68.0°  -61.5°  119.3°  -45.9° -122.8°  -20.2°   79.9°   H9            
E10    -124.9°   64.2°   78.6° -121.3°   78.6°  -87.8°  101.8°  -52.7° -117.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4p6rb_ :   (ARG165)  (ILE288)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d4j6tb_ :   (ARG165)  (ASP287)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d4j6ub_ :   (ASP166)  (ASP287)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d4hd7a_ :   (ARG165)  (ASP287)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d3nm8a_ :   (ARG165)  (ILE288)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d4j6ua_ :   (THR164)  (ILE288)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d4j6ta_ :   (ARG165)  (TYR286)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d4hd4b_ :   (ARG165)  (ILE288)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.86