Protein Concepts Dictionary

Tableau information

Concept source:  d4ob3b_  amino acid (a.a.) range (TRP29)(ASP217)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TRP29)   (GLY44) H1
	   (GLY47)   (GLN57) H2
	   (ASN59)   (GLU65) H3
	   (TRP70)   (GLY84) H4
	   (LEU88)  (GLU100) H5
	  (GLU114)  (ASN120) H6
	  (VAL170)  (GLY174) E7
	  (PRO179)  (GLY185) H8
	  (CYS189)  (THR199) E9
	  (ASN211)  (ASP217) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2      129.0°   H2                                                             
H3     -123.9° -106.4°   H3                                                      
H4       31.8°  107.2° -142.4°   H4                                               
H5      158.3°  -69.2°   43.5°  141.9°   H5                                        
H6       97.8°  -87.9°  -73.5°  123.9°  -94.1°   H6                                 
E7      -52.8° -124.1°  105.7°  -39.7°  109.0°  145.2°   E7                          
H8       95.3°  -76.9°  106.3°  -66.2°   76.4° -164.2°   50.6°   H8                   
E9      135.6°   57.9°  -64.9°  150.6°  -61.2°  -39.3°  169.5° -125.6°   E9            
E10      47.8° -118.1°  116.3°  -29.7°  116.4°  144.7°  -10.6°   50.1°  175.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3hhtb_ :    (ASP30)  (ASP218)   [view usage] : b.34.4.4 |SH3-like barrel |Electron transport accessory proteins |Nitrile hydratase beta chain |automated matches |Geobacillus pallidus [TaxId: 33936]
 d1ugpb_ :    (PRO38)  (ASP217)   [view usage] : b.34.4.4 |SH3-like barrel |Electron transport accessory proteins |Nitrile hydratase beta chain |Cobalt-containing nitrile hydratase |Pseudonocardia thermophila [TaxId: 1848]
 d2dppb_ :    (ASP30)  (ASP218)   [view usage] : b.34.4.4 |SH3-like barrel |Electron transport accessory proteins |Nitrile hydratase beta chain |automated matches |Bacillus sp. [TaxId: 218609]
 d1ireb_ :    (PRO38)  (ASP217)   [view usage] : b.34.4.4 |SH3-like barrel |Electron transport accessory proteins |Nitrile hydratase beta chain |Cobalt-containing nitrile hydratase |Pseudonocardia thermophila [TaxId: 1848]
 d4ob3b_ :    (TRP29)  (ASP217)   [view usage] : b.34.4.4 |SH3-like barrel |Electron transport accessory proteins |Nitrile hydratase beta chain |automated matches |Pseudonocardia thermophila [TaxId: 1848]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.34