Protein Concepts Dictionary

Tableau information

Concept source:  d1tueg_  amino acid (a.a.) range (PRO4)(TYR143)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO4)   (ASP26) H1
	   (ILE30)   (GLY54) H2
	   (ALA65)   (SER89) H3
	   (SER89)   (GLU94) H4
	  (GLU103)  (THR108) H5
	  (THR108)  (CYS113) H6
	  (CYS113)  (GLY117) E7
	  (GLN119)  (TYR124) E8
	  (MET133)  (ASP139) E9
	  (ASP139)  (TYR143) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2     -154.2°   H2                                                             
H3       45.4° -159.5°   H3                                                      
H4       74.8°   96.2°  -98.2°   H4                                               
H5       67.9° -104.0°   76.8°  131.4°   H5                                        
H6      106.7°  -98.7°   61.3° -120.9°  -99.2°   H6                                 
E7      -36.1°  129.4°  -69.7°   38.8°   98.2°  121.8°   E7                          
E8      -89.6°  -67.8°  123.5°  -99.6°   51.7°  138.9°  -93.7°   E8                   
E9       80.2° -125.5°  -36.8°  101.3° -101.7°  -29.7°   92.3°  153.4°   E9            
E10     143.1°  -57.4°  102.4° -137.1°  -90.0°   46.0°  166.7°  -99.6°  -75.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1tueb_ :     (THR3)  (MET144)   [view usage] : b.91.1.1 |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |Human papillomavirus type 18 [TaxId: 333761]
 d2nnua_ :     (SER0)  (GLU141)   [view usage] : b.91.1.1 |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |Human papillomavirus type 16 [TaxId: 333760]
 d1tuee_ :     (THR3)  (MET144)   [view usage] : b.91.1.1 |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |Human papillomavirus type 18 [TaxId: 333761]
 d1r6na_ :     (ALA3)  (GLN140)   [view usage] : b.91.1.1 |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |Human papillomavirus type 11 [TaxId: 10580]
 d1tueg_ :     (PRO4)  (TYR143)   [view usage] : b.91.1.1 |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |E2 regulatory, transactivation domain |Human papillomavirus type 18 [TaxId: 333761]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.91