Protein Concepts Dictionary

Tableau information

Concept source:  d4nzia_  amino acid (a.a.) range (ARG14)(ASP149)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHHEEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG14)   (PRO20) H1
	   (GLY24)   (LEU34) H2
	   (GLU35)   (LEU41) H3
	   (LEU41)   (ASN45) E4
	   (GLY46)   (SER51) E5
	   (SER51)   (SER57) H6
	   (SER58)   (ASN78) H7
	   (GLU86)  (GLY100) H8
	  (ARG102)  (GLY122) H9
	  (THR126)  (ASP149) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2      -89.7°   H2                                                             
H3      -40.0° -116.6°   H3                                                      
E4      -27.3° -117.0°  -28.5°   E4                                               
E5      123.1°  -83.9°  148.0°  121.2°   E5                                        
H6      -74.4°  154.3°   39.9°   49.8°  121.6°   H6                                 
H7     -150.7°  106.7°  110.9°  130.7°  -83.5°  -81.0°   H7                          
H8       51.0°  -45.9°   89.5°   75.6°  -88.7°  125.0° -152.4°   H8                   
H9      107.8°  129.7° -105.7°  -88.0°   46.8°  -75.2°  -80.5°  112.7°   H9            
H10     -53.1°  -70.6°   49.8°   68.4° -153.8°   83.7°  109.0°  -69.5°  155.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4mu5a_ :     (ARG3)  (ASP149)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Neuroglobin |Mouse (Mus musculus) [TaxId: 10090]
 d1w92a_ :    (ARG14)  (TRP148)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Neuroglobin |Mouse (Mus musculus) [TaxId: 10090]
 d1oj6c_ :    (ARG14)  (ASP149)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Neuroglobin |Human (Homo sapiens) [TaxId: 9606]
 d1oj6a_ :    (ARG14)  (ASP149)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Neuroglobin |Human (Homo sapiens) [TaxId: 9606]
 d4o35a_ :     (ARG3)  (ASP149)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Neuroglobin |Mouse (Mus musculus) [TaxId: 10090]
 d4o2ga_ :     (ARG3)  (ARG146)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Neuroglobin |Mouse (Mus musculus) [TaxId: 10090]
 d1oj6b_ :     (PRO6)  (GLY147)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Neuroglobin |Human (Homo sapiens) [TaxId: 9606]
 d4nzia_ :    (ARG14)  (ASP149)   [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Neuroglobin |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   a.1