Protein Concepts Dictionary

Tableau information

Concept source:  d2xbla_  amino acid (a.a.) range (ASN3)(THR149)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHEHEHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASN3)   (ASP26) H1
	   (ASP26)   (GLY47) H2
	   (GLY47)   (ASN55) E3
	   (GLY57)   (ARG72) H4
	   (PRO81)   (THR86) E5
	   (THR89)  (GLY100) H6
	  (PHE105)  (ALA111) H7
	  (ASP117)  (SER123) E8
	  (PRO129)  (GLY142) H9
	  (THR144)  (THR149) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2      -72.4°   H2                                                             
E3      147.0° -130.2°   E3                                                      
H4      -56.1°  -53.4° -154.4°   H4                                               
E5      140.4°  116.4°  -18.0° -161.2°   E5                                        
H6       87.7°  103.8°  -65.2°  140.3°  -52.9°   H6                                 
H7      -38.8°   39.5°  169.5°   28.4°  152.9°  112.5°   H7                          
E8      143.2° -142.3°  -14.8°  145.0°  -32.6°  -73.9°  173.4°   E8                   
H9      -19.8°   53.3° -162.3°   43.4°  147.7°   97.2°  -19.9° -162.9°   H9            
E10     144.2° -143.0°  -26.6°  131.6°  -44.6°  -87.0°  160.0°  -13.5° -161.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4u6na_ :     (VAL1)  (THR143)   [view usage] : c.80.1.3 |SIS domain |SIS domain |mono-SIS domain |automated matches |Escherichia coli [TaxId: 83333]
 d1tk9a_ :     (LEU3)  (SER144)   [view usage] : c.80.1.3 |SIS domain |SIS domain |mono-SIS domain |Phosphoheptose isomerase GmhA1 |Campylobacter jejuni [TaxId: 197]
 d1x92b_ :     (HIS0)  (THR145)   [view usage] : c.80.1.3 |SIS domain |SIS domain |mono-SIS domain |Phosphoheptose isomerase GmhA1 |Pseudomonas aeruginosa [TaxId: 287]
 d2x3yc_ :     (ARG4)  (THR149)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 272560]
 d2x3yb_ :     (GLU5)  (THR149)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 272560]
 d2xbla_ :     (ASN3)  (THR149)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 272560]
 d3trjd_ :     (THR2)  (LEU144)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Francisella tularensis [TaxId: 119856]
 d2xbld_ :     (ASN3)  (THR149)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 272560]
 d2x3ya_ :     (ASN3)  (THR149)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 272560]
 d2i2wa_ :     (TYR2)  (LEU144)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.80