Protein Concepts Dictionary

Tableau information

Concept source:  d1f3wa3  amino acid (a.a.) range (GLU396)(VAL526)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHEHEHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU396)  (SER402) H1
	  (LEU407)  (LYS421) H2
	  (ALA425)  (THR431) E3
	  (ARG435)  (ARG444) H4
	  (ALA447)  (THR453) E5
	  (ASN455)  (TYR465) H6
	  (PHE469)  (ASP475) E7
	  (ALA480)  (GLY500) H8
	  (VAL508)  (THR512) E9
	  (ASN522)  (VAL526) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2     -164.8°   H2                                                             
E3       30.3°  160.9°   E3                                                      
H4      121.8°  -51.8°  146.5°   H4                                               
E5       52.7°  136.3°  -24.7° -168.8°   E5                                        
H6      115.1°  -59.7°  138.2°   -8.6°  160.4°   H6                                 
E7      -72.0°  111.4°  -51.5°  161.0°  -30.1°  169.4°   E7                          
H8      145.1°  -42.9°  139.0°  -43.6°  133.6°  -45.5°  132.8°   H8                   
E9       19.4°  166.9°  -11.6°  140.0°  -33.4°  132.5°  -55.9°  146.8°   E9            
E10    -162.9°    7.7°  154.3°  -59.0°  129.7°  -67.0°  103.8°  -49.1°  159.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1f3wa3 :   (GLU396)  (VAL526)   [view usage] : c.49.1.1 |Pyruvate kinase C-terminal domain-like |PK C-terminal domain-like |Pyruvate kinase, C-terminal domain |Pyruvate kinase, C-terminal domain |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1pklg3 :   (GLU359)  (ILE494)   [view usage] : c.49.1.1 |Pyruvate kinase C-terminal domain-like |PK C-terminal domain-like |Pyruvate kinase, C-terminal domain |Pyruvate kinase, C-terminal domain |Trypanosome (Leishmania mexicana) [TaxId: 5665]
 d2g50a3 :   (GLU396)  (VAL526)   [view usage] : c.49.1.1 |Pyruvate kinase C-terminal domain-like |PK C-terminal domain-like |Pyruvate kinase, C-terminal domain |Pyruvate kinase, C-terminal domain |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d2vgga3 :   (GLU440)  (VAL570)   [view usage] : c.49.1.1 |Pyruvate kinase C-terminal domain-like |PK C-terminal domain-like |Pyruvate kinase, C-terminal domain |Pyruvate kinase, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d2vgia3 :   (GLU440)  (VAL570)   [view usage] : c.49.1.1 |Pyruvate kinase C-terminal domain-like |PK C-terminal domain-like |Pyruvate kinase, C-terminal domain |Pyruvate kinase, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d1f3xa3 :   (GLU396)  (VAL526)   [view usage] : c.49.1.1 |Pyruvate kinase C-terminal domain-like |PK C-terminal domain-like |Pyruvate kinase, C-terminal domain |Pyruvate kinase, C-terminal domain |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1a49a3 :   (GLU396)  (VAL526)   [view usage] : c.49.1.1 |Pyruvate kinase C-terminal domain-like |PK C-terminal domain-like |Pyruvate kinase, C-terminal domain |Pyruvate kinase, C-terminal domain |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1pkna3 :   (GLU396)  (VAL526)   [view usage] : c.49.1.1 |Pyruvate kinase C-terminal domain-like |PK C-terminal domain-like |Pyruvate kinase, C-terminal domain |Pyruvate kinase, C-terminal domain |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1a3wa3 :   (ASP367)  (VAL497)   [view usage] : c.49.1.1 |Pyruvate kinase C-terminal domain-like |PK C-terminal domain-like |Pyruvate kinase, C-terminal domain |Pyruvate kinase, C-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1pkma3 :   (GLU396)  (VAL526)   [view usage] : c.49.1.1 |Pyruvate kinase C-terminal domain-like |PK C-terminal domain-like |Pyruvate kinase, C-terminal domain |Pyruvate kinase, C-terminal domain |Cat (Felis catus) [TaxId: 9685]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.49