Protein Concepts Dictionary

Tableau information

Concept source:  d3bw7a1  amino acid (a.a.) range (PRO35)(GLY161)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHEHEEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO35)   (GLY45) H1
	   (ASN52)   (SER58) H2
	   (ALA71)   (SER76) E3
	   (THR78)   (SER90) H4
	   (THR97)  (GLY102) E5
	  (GLY116)  (ALA122) E6
	  (ALA122)  (ALA128) H7
	  (ARG132)  (ASP138) E8
	  (ARG140)  (GLY145) E9
	  (TRP150)  (GLY161) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2      106.1°   H2                                                             
E3       86.9°   93.3°   E3                                                      
H4     -130.1°  -86.3°  141.6°   H4                                               
E5       51.9°   77.6°  -46.2° -163.0°   E5                                        
E6       63.6°   85.6°  -27.8° -165.8°  -18.6°   E6                                 
H7       62.2°  116.7°  -30.9°  151.7°  -44.8°   31.5°   H7                          
E8      113.8°  -53.8°   43.8° -112.3°  -61.9°  -53.6°   74.0°   E8                   
E9      -80.2° -133.2°  133.4°   58.8°  130.9°  134.1°  107.2°  163.4°   E9            
H10      89.2°  -80.8°   12.6° -140.7°   41.8°   25.8°   40.8°  -33.3°  145.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3bw7a1 :    (PRO35)  (GLY161)   [view usage] : d.145.1.0 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |automated matches |automated matches |Maize (Zea mays) [TaxId: 4577]
 d1w1oa2 :    (ALA40)  (GLY161)   [view usage] : d.145.1.1 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |FAD-linked oxidases, N-terminal domain |Cytokinin dehydrogenase 1 |Maize (Zea mays) [TaxId: 4577]
 d2qkna1 :    (PRO35)  (GLY161)   [view usage] : d.145.1.0 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |automated matches |automated matches |Maize (Zea mays) [TaxId: 4577]
 d3s1fa1 :    (PRO35)  (GLY161)   [view usage] : d.145.1.0 |FAD-binding/transporter-associated domain-like |FAD-binding/transporter-associated domain-like |automated matches |automated matches |Maize (Zea mays) [TaxId: 4577]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.145