Protein Concepts Dictionary

Tableau information

Concept source:  d3qnrb_  amino acid (a.a.) range (SER31)(PHE143)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHEHEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER31)   (ILE45) H1
	   (ILE45)   (LEU57) H2
	   (LEU61)   (VAL67) E3
	   (ALA69)   (VAL75) H4
	   (VAL88)   (PRO93) E5
	   (VAL94)  (THR100) E6
	  (ASP103)  (LYS109) E7
	  (LYS113)  (GLY128) H8
	  (ALA130)  (VAL134) E9
	  (VAL134)  (PHE143) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2      -37.2°   H2                                                             
E3     -142.9°  163.1°   E3                                                      
H4      -98.5° -116.7°  -79.9°   H4                                               
E5       97.0°   78.4°  -85.4° -164.0°   E5                                        
E6      -99.3°  106.0°  -90.8°  -19.1° -157.5°   E6                                 
E7       24.6°  -13.0°  163.6° -108.7°   87.1°  101.6°   E7                          
H8      147.2°  154.9°  -39.6°   49.6° -114.4°   53.8°  155.1°   H8                   
E9      -76.5°  -64.8°   98.4° -169.5°   21.2° -169.5°  -70.6° -133.2°   E9            
E10     -22.7°  -28.0°  141.4° -121.1°   74.7° -119.6°  -22.3°  169.4°   54.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3veca_ :    (SER31)  (TYR142)   [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
 d3vedb_ :    (SER31)  (PHE143)   [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
 d3veeb_ :    (SER31)  (PHE143)   [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
 d3vefa_ :    (SER31)  (PHE143)   [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
 d3vefb_ :    (SER31)  (TYR142)   [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]
 d3vecb_ :    (SER31)  (TYR142)   [view usage] : d.58.4.0 |Ferredoxin-like |Dimeric alpha+beta barrel |automated matches |automated matches |Rhodococcus jostii [TaxId: 101510]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.58