Tableau information
Concept source: d4ozru_ amino acid (a.a.) range (ILE227)(CYS365)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: HHEEHHHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE227) (GLY237) H1
(TRP238) (SER250) H2
(ASP255) (GLY260) E3
(GLY262) (ARG267) E4
(ARG267) (ALA273) H5
(GLY276) (ASN294) H6
(ARG297) (PHE309) H7
(SER318) (VAL339) H8
(ARG347) (LEU353) H9
(ARG354) (CYS365) H10
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -54.8° H2
E3 -149.9° 113.7° E3
E4 47.2° -94.2° 151.7° E4
H5 -98.4° -152.1° 85.5° -66.8° H5
H6 106.1° -60.2° 85.3° -113.9° 145.2° H6
H7 113.6° 168.3° -75.8° 75.9° 16.6° 129.5° H7
H8 -59.1° 16.9° 119.2° -88.8° -155.1° 48.8° -162.1° H8
H9 84.1° 120.0° -79.6° 82.7° 40.8° -163.3° -53.2° 135.1° H9
H10 80.7° 112.4° -79.6° 86.0° 49.0° -158.4° -61.3° 127.9° -8.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1xiua_ : (PRO267) (LEU394) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Biomphalaria glabrata [TaxId: 6526]
d4ozru_ : (ILE227) (CYS365) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Pediculus humanus [TaxId: 121224]
d1zh7a_ : (VAL390) (GLY543) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Orphan nuclear receptor NR5a2 (LRH-1) |Mouse (Mus musculus) [TaxId: 10090]
d1xvpc_ : (PRO293) (LYS440) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoid-X receptor alpha (RXR-alpha) |Human (Homo sapiens) [TaxId: 9606]
d1g1uc_ : (PRO293) (GLU434) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoid-X receptor alpha (RXR-alpha) |Human (Homo sapiens) [TaxId: 9606]
d2e2ra_ : (SER293) (GLY442) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3f5ca_ : (VAL390) (GLY543) [view usage] : a.123.1.0 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1fm6a_ : (PRO293) (ILE442) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoid-X receptor alpha (RXR-alpha) |Human (Homo sapiens) [TaxId: 9606]
d2zasa_ : (SER293) (GLY442) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1g50a_ : (THR371) (ASN532) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Estrogen receptor alpha |Human (Homo sapiens) [TaxId: 9606]
d1lbda_ : (PRO293) (HIS435) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoid-X receptor alpha (RXR-alpha) |Human (Homo sapiens) [TaxId: 9606]
d1xiub_ : (PRO267) (ILE416) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Biomphalaria glabrata [TaxId: 6526]
d1g1ua_ : (PRO293) (GLU434) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoid-X receptor alpha (RXR-alpha) |Human (Homo sapiens) [TaxId: 9606]
d1yucb_ : (VAL371) (GLY524) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4dm6b_ : (THR1255) (GLU1403) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoic acid receptor beta (RAR-beta) |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.123