Protein Concepts Dictionary

Tableau information

Concept source:  d1tn0a_  amino acid (a.a.) range (GLU9)(SER226)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHEEHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLU9)   (VAL34) H1
	   (PRO37)   (GLY63) H2
	   (GLY65)   (PHE71) E3
	   (ASN76)   (ALA81) E4
	   (ALA81)  (ASP102) H5
	  (ASP104)  (THR128) H6
	  (VAL130)  (PHE156) H7
	  (PHE156)  (ARG164) H8
	  (ARG164)  (LEU190) H9
	  (LEU201)  (SER226) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2     -157.9°   H2                                                             
E3      136.5°  -62.5°   E3                                                      
E4      -14.9°  143.5°  150.5°   E4                                               
H5       34.9° -166.0° -109.6°   48.1°   H5                                        
H6     -161.7°   -4.4°   59.9° -147.0°  161.6°   H6                                 
H7       27.8° -162.2° -124.7°   37.4°   16.2° -160.0°   H7                          
H8       32.4° -139.3° -149.7°   28.8°   43.7° -139.8°  -27.5°   H8                   
H9     -161.0°   18.0°  -47.2° -152.5° -156.8°   17.8° -170.1°  157.2°   H9            
H10      10.1° -163.4°  134.1°  -21.2°   26.9° -165.7°   17.8°   27.2° -171.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2jafa_ :    (ASN26)  (LEU249)   [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |automated matches |Halobacterium salinarium [TaxId: 2242]
 d1e12a_ :    (GLU25)  (LEU249)   [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |Halorhodopsin |Halobacterium salinarum [TaxId: 2242]
 d3haoa_ :    (TRP10)  (SER226)   [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |automated matches |Halobacterium salinarum [TaxId: 2242]
 d4l35a_ :     (ALA8)  (LYS220)   [view usage] : f.13.1.0 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |automated matches |automated matches |Haloarcula vallismortis [TaxId: 28442]
 d1q5ia_ :    (TRP10)  (SER226)   [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |Bacteriorhodopsin |Halobacterium salinarum [TaxId: 2242]
 d4fbza_ :     (SER9)  (LYS216)   [view usage] : f.13.1.0 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |automated matches |automated matches |Haloterrigena thermotolerans [TaxId: 121872]
 d1tn0a_ :     (GLU9)  (SER226)   [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |Bacteriorhodopsin |Halobacterium salinarum [TaxId: 2242]
 d4jr8a_ :     (GLU5)  (LYS220)   [view usage] : f.13.1.0 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |automated matches |automated matches |Haloarcula vallismortis [TaxId: 28442]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  f.13