Protein Concepts Dictionary

Tableau information

Concept source:  d2v58a2  amino acid (a.a.) range (LYS116)(ILE267)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHEEHEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS116)  (GLY127) H1
	  (ASP141)  (ILE152) H2
	  (PRO155)  (ALA160) E3
	  (GLY168)  (GLY174) E4
	  (GLY174)  (SER194) H5
	  (ASP196)  (LYS202) E6
	  (ARG208)  (GLY218) E7
	  (GLY220)  (MET232) E8
	  (VAL239)  (ALA243) E9
	  (THR249)  (ILE267) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2       42.9°   H2                                                             
E3      118.3°  127.8°   E3                                                      
E4      -69.9°  -78.0°  151.3°   E4                                               
H5      110.2°  107.8°  -21.3° -171.9°   H5                                        
E6       42.0°  -30.5°  155.9°  -47.6°  137.8°   E6                                 
E7       79.0°  100.9°  -39.3°  134.8°  -39.5°  119.6°   E7                          
E8     -118.5°  -86.0°  120.7°  -67.3°  118.1°  -76.5°  157.6°   E8                   
E9       17.8°   51.3° -100.5°   86.3°  -92.9°   58.6°  -61.5°  134.4°   E9            
H10     112.6°  146.2°  -31.6°  120.0°  -52.1°  151.3°  -45.6°  126.5°  -98.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1dv2a3 :   (ASP115)  (TYR255)   [view usage] : d.142.1.2 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |BC ATP-binding domain-like |Biotin carboxylase (BC), domain 2 |Escherichia coli [TaxId: 562]
 d3g8db2 :   (ASP115)  (TYR255)   [view usage] : d.142.1.2 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |BC ATP-binding domain-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2v58a2 :   (LYS116)  (ILE267)   [view usage] : d.142.1.2 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |BC ATP-binding domain-like |Biotin carboxylase (BC), domain 2 |Escherichia coli [TaxId: 562]
 d2vqda2 :   (LYS116)  (GLY268)   [view usage] : d.142.1.0 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d2vpqa2 :   (LYS115)  (ASN266)   [view usage] : d.142.1.0 |ATP-grasp |Glutathione synthetase ATP-binding domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.142