Protein Concepts Dictionary

Tableau information

Concept source:  d1hkxb_  amino acid (a.a.) range (ASP342)(GLY471)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHEEHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP342)  (GLY364) H1
	  (GLU367)  (CYS373) H2
	  (MET377)  (GLU381) E3
	  (ASN387)  (GLY391) E4
	  (LEU392)  (SER407) H5
	  (PRO409)  (ILE414) E6
	  (ASN416)  (MET422) E7
	  (ALA427)  (TYR437) E8
	  (ARG445)  (ASP459) E9
	  (LYS461)  (GLY471) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2     -142.5°   H2                                                             
E3      -68.3°  113.9°   E3                                                      
E4       97.0°  -96.3°  146.3°   E4                                               
H5      -68.2°  146.7°   57.1°  -89.5°   H5                                        
E6      153.4°   15.1°  105.4° -100.3°  131.6°   E6                                 
E7      117.2°   43.5°  151.6°  -62.1° -151.1°  -56.2°   E7                          
E8      -39.7° -158.6°  -44.7°  104.6°   31.8°  148.5° -154.7°   E8                   
E9      120.2°   53.5°  167.3°  -45.6° -133.4°  -62.6°  -17.9°  147.9°   E9            
E10     -67.5° -103.4°   17.3°  160.2°   73.7°   98.7°  135.2°  -55.6°  152.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1hkxd_ :   (GLU339)  (GLY471)   [view usage] : d.17.4.7 |Cystatin-like |NTF2-like |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Mouse (Mus musculus) [TaxId: 10090]
 d1hkxh_ :   (THR336)  (GLY471)   [view usage] : d.17.4.7 |Cystatin-like |NTF2-like |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Mouse (Mus musculus) [TaxId: 10090]
 d1hkxc_ :   (THR337)  (GLY471)   [view usage] : d.17.4.7 |Cystatin-like |NTF2-like |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Mouse (Mus musculus) [TaxId: 10090]
 d1hkxa_ :   (THR337)  (GLY471)   [view usage] : d.17.4.7 |Cystatin-like |NTF2-like |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Mouse (Mus musculus) [TaxId: 10090]
 d1hkxb_ :   (ASP342)  (GLY471)   [view usage] : d.17.4.7 |Cystatin-like |NTF2-like |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Mouse (Mus musculus) [TaxId: 10090]
 d2f86b1 :   (ASN343)  (THR471)   [view usage] : d.17.4.7 |Cystatin-like |NTF2-like |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Association domain of calcium/calmodulin-dependent protein kinase type II alpha subunit, CAMK2A |Nematode (Caenorhabditis elegans) [TaxId: 6239]
 d3t8na_ :     (THR5)  (TRP120)   [view usage] : d.17.4.3 |Cystatin-like |NTF2-like |Ketosteroid isomerase-like |Delta-5-3-ketosteroid isomerase, steroid delta-isomerase, KSI |Pseudomonas putida [TaxId: 303]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.17