Protein Concepts Dictionary

Tableau information

Concept source:  d1ouna_  amino acid (a.a.) range (PRO5)(LEU121)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HHEEHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO5)   (ASP23) H1
	   (ASP25)   (ALA31) H2
	   (SER37)   (GLU42) E3
	   (GLN44)   (GLY48) E4
	   (GLY48)   (LEU59) H5
	   (LYS63)   (ILE68) E6
	   (THR69)   (PRO75) E7
	   (SER79)   (ASP92) E8
	   (PRO95)  (ASN107) E9
	  (THR115)  (LEU121) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
H2     -145.3°   H2                                                             
E3      -64.6°  137.3°   E3                                                      
E4      103.2°  -57.0°  165.7°   E4                                               
H5      -51.9°  162.8°   36.2° -130.7°   H5                                        
E6     -162.3°   50.5°   97.9°  -93.7°  112.4°   E6                                 
E7      133.5°  -12.4°  145.7°  -48.2° -173.6°  -62.8°   E7                          
E8      -32.2° -174.6°  -40.1°  125.7°   20.3°  131.1° -165.6°   E8                   
E9      128.5°   24.6°  161.8°  -32.4° -160.2°  -69.2°  -16.5°  157.3°   E9            
E10     -61.3°  144.4°   -8.5°  158.0°   27.7°  101.0°  153.8°  -33.7°  169.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1jb4a_ :     (PRO5)  (LEU121)   [view usage] : d.17.4.2 |Cystatin-like |NTF2-like |NTF2-like |Nuclear transport factor-2 (NTF2) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1gy7c_ :     (THR7)  (ASN116)   [view usage] : d.17.4.2 |Cystatin-like |NTF2-like |NTF2-like |Nuclear transport factor-2 (NTF2) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1gy7b_ :     (ASP4)  (VAL114)   [view usage] : d.17.4.2 |Cystatin-like |NTF2-like |NTF2-like |Nuclear transport factor-2 (NTF2) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1jb2a_ :     (PRO5)  (LEU121)   [view usage] : d.17.4.2 |Cystatin-like |NTF2-like |NTF2-like |Nuclear transport factor-2 (NTF2) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1jb5a_ :     (PRO5)  (LEU121)   [view usage] : d.17.4.2 |Cystatin-like |NTF2-like |NTF2-like |Nuclear transport factor-2 (NTF2) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1zo2b_ :     (GLN9)  (PHE119)   [view usage] : d.17.4.0 |Cystatin-like |NTF2-like |automated matches |automated matches |Cryptosporidium parvum [TaxId: 5807]
 d1gy7d_ :     (ASN6)  (VAL114)   [view usage] : d.17.4.2 |Cystatin-like |NTF2-like |NTF2-like |Nuclear transport factor-2 (NTF2) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2rgqb_ :     (THR4)  (VAL126)   [view usage] : d.17.4.25 |Cystatin-like |NTF2-like |Rv3472-like |Uncharacterized protein NpunR3134 |Nostoc punctiforme [TaxId: 272131]
 d3dxob_ :     (MSE1)  (ALA118)   [view usage] : d.17.4.19 |Cystatin-like |NTF2-like |Atu0744-like |Uncharacterized protein Atu0744 |Agrobacterium tumefaciens [TaxId: 358]
 d1u5oa_ :     (PRO5)  (PHE126)   [view usage] : d.17.4.2 |Cystatin-like |NTF2-like |NTF2-like |Nuclear transport factor-2 (NTF2) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1qmac_ :     (PRO5)  (LEU121)   [view usage] : d.17.4.2 |Cystatin-like |NTF2-like |NTF2-like |Nuclear transport factor-2 (NTF2) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1ouna_ :     (PRO5)  (LEU121)   [view usage] : d.17.4.2 |Cystatin-like |NTF2-like |NTF2-like |Nuclear transport factor-2 (NTF2) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2rgqa1 :     (ALA5)  (VAL126)   [view usage] : d.17.4.25 |Cystatin-like |NTF2-like |Rv3472-like |Uncharacterized protein NpunR3134 |Nostoc punctiforme [TaxId: 272131]
 d1ar0a_ :     (PRO5)  (PHE126)   [view usage] : d.17.4.2 |Cystatin-like |NTF2-like |NTF2-like |Nuclear transport factor-2 (NTF2) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1gy6a_ :     (PRO5)  (GLY127)   [view usage] : d.17.4.2 |Cystatin-like |NTF2-like |NTF2-like |Nuclear transport factor-2 (NTF2) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1zo2a1 :    (PHE10)  (ILE118)   [view usage] : d.17.4.2 |Cystatin-like |NTF2-like |NTF2-like |Nuclear transport factor-2 (NTF2) |Cryptosporidium parvum [TaxId: 5807]
 d1a2ka_ :     (PRO5)  (LEU121)   [view usage] : d.17.4.2 |Cystatin-like |NTF2-like |NTF2-like |Nuclear transport factor-2 (NTF2) |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.17