Protein Concepts Dictionary

Tableau information

Concept source:  d1uhia_  amino acid (a.a.) range (ARG11)(PHE172)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG11)   (ASP24) H1
	   (GLY29)   (LEU33) E2
	   (LEU33)   (GLY49) H3
	   (THR51)   (GLY70) H4
	   (GLY74)   (TRP79) E5
	   (TRP79)  (ASN100) H6
	  (THR103)  (VAL116) H7
	  (LEU126)  (GLY137) H8
	  (SER142)  (CYS152) H9
	  (ASP161)  (PHE172) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2       78.8°   E2                                                             
H3       71.1°  -66.9°   H3                                                      
H4     -130.3° -127.9°  152.6°   H4                                               
E5     -139.8°  133.3°  -97.4°   55.3°   E5                                        
H6      116.8°   43.8°  -64.4°  108.5°  -89.5°   H6                                 
H7       45.8°   75.2°  -26.9° -156.9° -111.0°  -88.3°   H7                          
H8       69.4°  120.1°  136.9°  -60.9° -101.6°  152.6°  110.2°   H8                   
H9     -141.0°  -62.3°  -94.9°   77.4°   76.5°  -31.7° -120.0°  126.9°   H9            
H10    -108.9° -142.3°  150.8°  -23.3°   63.0° -131.8°  137.1°  -41.6°  100.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1uhhb_ :     (ASN9)  (PHE172)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Jellyfish (Aequorea victoria) [TaxId: 6100]
 d1jf2a_ :    (ASN15)  (THR181)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calcium-regulated photoprotein |Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
 d1sl8a_ :    (LYS13)  (PHE174)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calcium-regulated photoprotein |Jellyfish (Aequorea victoria), aequorin 1 [TaxId: 6100]
 d2hpsa_ :     (THR5)  (LEU168)   [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Renilla muelleri [TaxId: 37510]
 d1uhia_ :    (ARG11)  (PHE172)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Jellyfish (Aequorea victoria) [TaxId: 6100]
 d1jf0a_ :    (ASN15)  (PHE178)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calcium-regulated photoprotein |Hydrozoa (Obelia geniculata), obelin [TaxId: 185004]
 d1uhha_ :    (PRO10)  (THR175)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Jellyfish (Aequorea victoria) [TaxId: 6100]
 d2f8pa_ :    (ARG17)  (PHE178)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calcium-regulated photoprotein |Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
 d1el4a_ :    (PRO16)  (LEU182)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calcium-regulated photoprotein |Hydrozoa (Obelia longissima), obelin [TaxId: 32570]
 d4n1ga_ :    (ASN15)  (TRP179)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Obelia longissima [TaxId: 32570]
 d4nqga_ :    (ASN17)  (PHE180)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Mitrocoma cellularia [TaxId: 31874]
 d1ej3a_ :    (PRO10)  (THR175)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calcium-regulated photoprotein |Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]
 d4mrya_ :    (ASN15)  (TRP179)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Obelia longissima [TaxId: 32570]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.39