Protein Concepts Dictionary

Tableau information

Concept source:  d1jrya3  amino acid (a.a.) range (GLU378)(GLU498)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU378)  (GLY384) H1
	  (GLY384)  (ASN389) E2
	  (THR401)  (GLN412) H3
	  (LYS415)  (PHE421) E4
	  (ASP423)  (LEU429) H5
	  (ASP433)  (GLY439) H6
	  (VAL440)  (ASP445) E7
	  (SER446)  (GLU454) H8
	  (GLY458)  (GLY475) H9
	  (ASN493)  (GLU498) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2     -113.9°   E2                                                             
H3       95.6°   36.8°   H3                                                      
E4       51.8°  149.4°  112.9°   E4                                               
H5      120.7° -122.0° -141.7°   84.5°   H5                                        
H6     -126.2°   43.1°  -33.5° -118.2° -108.2°   H6                                 
E7       28.0°  103.1°   73.9°  -50.5° -134.5° -100.1°   E7                          
H8     -158.2°  -47.0°  -73.7°  149.8°   75.3°   50.9°  147.5°   H8                   
H9      -58.7°  145.3°  153.9°  -56.9°   64.3° -170.5°  -82.8°  128.3°   H9            
E10    -137.0°  -50.5°  -86.0°  159.7°   75.8°   73.3°  148.0°  -26.4°  108.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1q9ia3 :   (GLU378)  (GLU498)   [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Flavocytochrome c3 (respiratory fumarate reductase) |Shewanella frigidimarina [TaxId: 56812]
 d2b7sa3 :   (GLU378)  (GLU498)   [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Flavocytochrome c3 (respiratory fumarate reductase) |Shewanella frigidimarina [TaxId: 56812]
 d1jrya3 :   (GLU378)  (GLU498)   [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Flavocytochrome c3 (respiratory fumarate reductase) |Shewanella frigidimarina [TaxId: 56812]
 d1jrxa3 :   (GLU378)  (GLU498)   [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Flavocytochrome c3 (respiratory fumarate reductase) |Shewanella frigidimarina [TaxId: 56812]
 d1qo8a3 :   (GLU373)  (VAL494)   [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Flavocytochrome c3 (respiratory fumarate reductase) |Shewanella frigidimarina [TaxId: 56812]
 d1lj1a3 :   (GLU378)  (GLU498)   [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Flavocytochrome c3 (respiratory fumarate reductase) |Shewanella frigidimarina [TaxId: 56812]
 d1p2ea3 :   (GLU378)  (GLU498)   [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Flavocytochrome c3 (respiratory fumarate reductase) |Shewanella frigidimarina [TaxId: 56812]
 d1ksua3 :   (GLU378)  (GLU498)   [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Flavocytochrome c3 (respiratory fumarate reductase) |Shewanella frigidimarina [TaxId: 56812]
 d1d4ca3 :   (GLU377)  (GLU497)   [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Flavocytochrome c3 (respiratory fumarate reductase) |Shewanella putrefaciens [TaxId: 24]
 d1jrza3 :   (GLU378)  (GLU498)   [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Flavocytochrome c3 (respiratory fumarate reductase) |Shewanella frigidimarina [TaxId: 56812]
 d1e39a3 :   (GLU378)  (GLU498)   [view usage] : d.168.1.1 |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain |Flavocytochrome c3 (respiratory fumarate reductase) |Shewanella frigidimarina [TaxId: 56812]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.168