Protein Concepts Dictionary

Tableau information

Concept source:  d1wcv1_  amino acid (a.a.) range (THR101)(GLN247)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR101)  (LEU107) H1
	  (ASP113)  (ALA119) E2
	  (SER124)  (ALA134) H3
	  (GLU135)  (VAL141) E4
	  (GLU144)  (GLY164) H5
	  (ARG168)  (MET178) E6
	  (LEU184)  (GLY198) H7
	  (TRP203)  (ASN209) E8
	  (ASN209)  (GLY219) H9
	  (SER229)  (GLN247) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2      150.9°   E2                                                             
H3      -53.7° -155.3°   H3                                                      
E4      119.9°  -47.3° -131.2°   E4                                               
H5      -72.4°  117.7°  -62.4°  164.9°   H5                                        
E6       98.6°  -65.8°  120.4°  -21.2°  166.9°   E6                                 
H7      -88.6°  113.0°  -53.8°  148.5°  -28.5° -164.3°   H7                          
E8       94.9°  -56.9°  144.6°  -46.0°  129.0°  -40.6°  153.1°   E8                   
H9       73.8°  -89.7°  106.9° -117.3°   55.1° -113.7°   81.6°  -73.8°   H9            
H10     -87.4°  115.3°  -50.5°  147.8°  -30.9°  161.4°   -3.8° -156.9°  -84.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2beja_ :   (THR101)  (ALA249)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
 d2bekb_ :   (THR101)  (GLN247)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
 d1wcv1_ :   (THR101)  (GLN247)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
 d1a82a_ :    (SER95)  (LEU224)   [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Dethiobiotin synthetase |Escherichia coli [TaxId: 562]
 d3fwya_ :   (HIS142)  (GLY276)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
 d2beka_ :   (THR101)  (GLU248)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
 d1g5pa_ :    (CYS97)  (ASP249)   [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
 d1rw4a_ :   (ARG100)  (ASP249)   [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
 d2ynmb_ :   (HIS140)  (ILE273)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Prochlorococcus marinus [TaxId: 1219]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37