Tableau information
Concept source: d2j6xb_ amino acid (a.a.) range (PRO224)(GLY353)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO224) (SER234) H1
(PRO237) (GLY242) E2
(GLU247) (GLY256) H3
(SER258) (ASN264) E4
(GLY275) (VAL287) H5
(PRO292) (SER297) E6
(GLY302) (GLY312) H7
(ASP314) (ARG320) E8
(ARG320) (LEU328) H9
(GLY330) (GLY353) H10
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 152.9° E2
H3 -38.0° 156.2° H3
E4 132.2° -20.7° 150.7° E4
H5 -70.8° 135.8° -50.2° 156.0° H5
E6 123.3° -30.4° 139.1° -11.8° 165.7° E6
H7 -98.6° 108.4° -71.1° 129.2° -28.2° 137.5° H7
E8 100.3° -57.9° 107.9° -42.8° 154.3° -31.2° 144.4° E8
H9 59.3° -95.0° 82.1° -74.9° -129.0° -64.6° -153.1° -43.1° H9
H10 -104.8° 87.3° -111.5° 97.6° -65.7° 108.8° -61.3° 139.4° 135.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2nxga_ : (GLU1089) (GLY1215) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Aquifex aeolicus [TaxId: 63363]
d3l65a_ : (ARG209) (GLY343) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d1rd5a_ : (PRO128) (GLY262) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Trp synthase alpha-subunit |Maize (Zea mays) [TaxId: 4577]
d4n6fa_ : (ASN122) (GLY247) [view usage] : c.1.31.0 |TIM beta/alpha-barrel |ThiG-like |automated matches |automated matches |Amycolatopsis orientalis [TaxId: 797057]
d1z41a1 : (ARG195) (ASN325) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |NADPH dehydrogenase NamA |Bacillus subtilis [TaxId: 1423]
d3c3na_ : (PHE145) (LYS298) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |automated matches |Trypanosoma cruzi [TaxId: 5693]
d1p4ca_ : (ASN213) (GLN339) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Membrane-associated (S)-mandelate dehydrogenase |Pseudomonas putida [TaxId: 303]
d2dzvb_ : (ALA122) (GLY247) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Trp synthase alpha-subunit |Pyrococcus furiosus [TaxId: 2261]
d3l66a_ : (ARG209) (GLU341) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d1jrca_ : (PHE143) (GLY297) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Lactococcus lactis, isozyme A [TaxId: 1358]
d3hf3a_ : (PHE204) (GLY336) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Thermus scotoductus [TaxId: 37636]
d2rdua_ : (TRP219) (GLY348) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1tjra1 : (ALA216) (PRO346) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Trp synthase alpha-subunit |Maize (Zea mays) [TaxId: 4577]
d1ykwa1 : (GLY269) (GLY409) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Chlorobium tepidum [TaxId: 1097]
d3ct7a_ : (ALA95) (LEU218) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3ng3c_ : (THR4) (VAL119) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
d4tu1b_ : (SER146) (LYS305) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Toxoplasma gondii [TaxId: 5811]
d4ab4a_ : (ARG204) (ALA323) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Pseudomonas putida [TaxId: 160488]
d3l67a_ : (ARG209) (GLY343) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d2vepa_ : (PRO111) (THR239) [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |automated matches |Streptomyces coelicolor [TaxId: 1902]
d4tx9a_ : (PRO115) (GLN245) [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |automated matches |Streptomyces sviceus [TaxId: 463191]
d2ef9a_ : (GLU89) (GLY215) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |automated matches |Aquifex aeolicus [TaxId: 63363]
d2r8wb_ : (THR115) (GLY235) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d1lrqa_ : (GLU1089) (GLY1215) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Aquifex aeolicus [TaxId: 63363]
d1k02a_ : (ARG222) (LYS362) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
d2j6xb_ : (PRO224) (GLY353) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Aerococcus viridans [TaxId: 1377]
d2hbvb_ : (ASP59) (GLY213) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d2rdwa_ : (TRP219) (GLY348) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3cepa_ : (SER136) (ARG267) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Trp synthase alpha-subunit |Salmonella typhimurium [TaxId: 90371]
d2a7na_ : (ASN213) (GLY341) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |automated matches |Pseudomonas putida [TaxId: 303]
d4n6fb_ : (ASP121) (GLY247) [view usage] : c.1.31.0 |TIM beta/alpha-barrel |ThiG-like |automated matches |automated matches |Amycolatopsis orientalis [TaxId: 797057]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1