Tableau information
Concept source: d3e05g_ amino acid (a.a.) range (GLN234)(ASN349)
nSSEs in this Concept: 10
String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN234) (LEU244) H1
(LEU250) (GLY256) E2
(ALA260) (MET270) H3
(GLY273) (GLU279) E4
(PRO282) (LYS294) H5
(ASN299) (GLU304) E6
(ALA307) (ASP313) H7
(ASP318) (ILE322) E8
(LEU329) (ARG339) H9
(GLU343) (ASN349) E10
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 138.8° E2
H3 -51.2° -170.0° H3
E4 128.1° -12.2° -173.5° E4
H5 -79.7° 141.5° -28.5° 150.7° H5
E6 109.0° -31.1° 157.9° -19.3° -164.3° E6
H7 -48.4° 153.2° -28.2° 145.5° -43.7° 133.4° H7
E8 147.7° -12.9° 158.6° -25.0° 131.6° -43.4° 159.0° E8
H9 -34.5° 169.1° -19.1° 157.2° -46.1° 138.9° -20.5° -177.6° H9
E10 161.8° -24.4° 145.8° -36.1° 117.8° -55.4° 148.3° -14.2° 163.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1yb5a2 : (PHE123) (VAL246) [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Quinone oxidoreductase |Human (Homo sapiens) [TaxId: 9606]
d1i4wa_ : (PRO26) (PRO173) [view usage] : c.66.1.24 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA adenine dimethylase-like |Transcription factor sc-mtTFB |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1v3ta2 : (GLY132) (CYS239) [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase |Guinea pig (Cavia porcellus) [TaxId: 10141]
d2ag5b_ : (GLY2) (MET131) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3tpzb_ : (GLN23) (MET139) [view usage] : c.66.1.24 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA adenine dimethylase-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1fbna_ : (SER57) (ALA177) [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Methanococcus jannaschii [TaxId: 2190]
d4df3a_ : (SER60) (ALA181) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Aeropyrum pernix [TaxId: 56636]
d3orhd_ : (THR47) (ASN170) [view usage] : c.66.1.16 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Guanidinoacetate methyltransferase |Guanidinoacetate methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d3orhb_ : (THR47) (ASN170) [view usage] : c.66.1.16 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Guanidinoacetate methyltransferase |Guanidinoacetate methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d4jxja_ : (ASP27) (MET142) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Rickettsia bellii [TaxId: 336407]
d2aowa_ : (LYS39) (VAL172) [view usage] : c.66.1.19 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Histamine methyltransferase |Histamine methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d1g8sa_ : (SER57) (ALA177) [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Methanococcus jannaschii [TaxId: 2190]
d2nvba2 : (ASP150) (VAL265) [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Bacterial secondary alcohol dehydrogenase |Thermoanaerobacter brockii [TaxId: 29323]
d3orha_ : (THR47) (ASN170) [view usage] : c.66.1.16 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Guanidinoacetate methyltransferase |Guanidinoacetate methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d2as0a2 : (ARG205) (SER335) [view usage] : c.66.1.51 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |hypothetical RNA methyltransferase |Hypothetical protein PH1915, middle and C-terminal domains |Pyrococcus horikoshii [TaxId: 53953]
d1bxza2 : (ASP150) (VAL265) [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Bacterial secondary alcohol dehydrogenase |Thermoanaerobacter brockii [TaxId: 29323]
d2ag5c_ : (GLY2) (MET131) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2yxda_ : (GLU21) (ILE132) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
d1uwva2 : (ASN267) (VAL387) [view usage] : c.66.1.40 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |(Uracil-5-)-methyltransferase |rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain |Escherichia coli [TaxId: 562]
d1nt2a_ : (SER41) (MET160) [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Archaeoglobus fulgidus [TaxId: 2234]
d3tpza_ : (GLN23) (MET139) [view usage] : c.66.1.24 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA adenine dimethylase-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3cbga_ : (SER45) (ASN170) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
d3ntva_ : (ARG57) (ASN176) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Staphylococcus aureus [TaxId: 196620]
d3f0rb_ : (ASP157) (GLY302) [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1pqwa_ : (ASN14) (LEU136) [view usage] : c.2.1.1 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Alcohol dehydrogenase-like, C-terminal domain |Putative enoyl reductase domain of polyketide synthase |Mycobacterium tuberculosis [TaxId: 1773]
d1ws6a1 : (PRO38) (GLN160) [view usage] : c.66.1.46 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |YhhF-like |Methyltransferase TTHA0928 |Thermus thermophilus [TaxId: 274]
d2fhpa1 : (THR25) (THR151) [view usage] : c.66.1.46 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |YhhF-like |Putative methylase EF2452 |Enterococcus faecalis [TaxId: 1351]
d3tr6a_ : (ALA46) (ASN171) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.2, c.66, c.42