Protein Concepts Dictionary

Tableau information

Concept source:  d1jhda2  amino acid (a.a.) range (THR179)(HIS332)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR179)  (GLY191) H1
	  (LYS194)  (GLN199) E2
	  (ALA207)  (ASP220) H3
	  (GLY223)  (LEU229) E4
	  (PRO239)  (PHE255) H5
	  (THR259)  (PHE267) E6
	  (GLY273)  (GLY288) H7
	  (THR290)  (ARG296) E8
	  (PHE308)  (ASP316) H9
	  (GLU326)  (HIS332) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2      137.5°   E2                                                             
H3      -62.5°  157.9°   H3                                                      
E4      159.9°  -23.5°  137.6°   E4                                               
H5      -19.9°  149.2°  -46.3°  170.0°   H5                                        
E6     -175.4°  -47.1°  113.0°  -24.6°  156.4°   E6                                 
H7      -56.0°  135.3°  -59.1°  127.7°  -62.1°  121.7°   H7                          
E8      112.8°  -38.3°  136.0°  -55.8°  114.6°  -70.7°  158.4°   E8                   
H9      -90.4°  131.4°  -28.0°  109.6°  -74.0°   85.0°  -71.5° -129.4°   H9            
E10      89.9°  -50.1°  140.2°  -73.3°   99.1°  -94.4°  129.4°  -29.3° -152.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1v47a2 :   (THR142)  (GLY289)   [view usage] : c.26.1.5 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |ATP sulfurylase catalytic domain |ATP sulfurylase catalytic domain |Thermus thermophilus [TaxId: 274]
 d1jhda2 :   (THR179)  (HIS332)   [view usage] : c.26.1.5 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |ATP sulfurylase catalytic domain |ATP sulfurylase catalytic domain |Sulfur-oxidizing endosymbiont of Riftia pachyptila [TaxId: 35843]
 d1x6vb2 :   (THR399)  (ARG561)   [view usage] : c.26.1.5 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |ATP sulfurylase catalytic domain |ATP sulfurylase catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d1g8fa2 :   (THR175)  (TYR333)   [view usage] : c.26.1.5 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |ATP sulfurylase catalytic domain |ATP sulfurylase catalytic domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1i2da2 :   (THR177)  (GLN331)   [view usage] : c.26.1.5 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |ATP sulfurylase catalytic domain |ATP sulfurylase catalytic domain |Fungus (Penicillium chrysogenum) [TaxId: 5076]
 d4dnxa2 :   (THR179)  (ASN332)   [view usage] : c.26.1.5 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |ATP sulfurylase catalytic domain |automated matches |Allochromatium vinosum [TaxId: 572477]
 d1x6va2 :   (THR399)  (ARG561)   [view usage] : c.26.1.5 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |ATP sulfurylase catalytic domain |ATP sulfurylase catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d1r6xa2 :   (THR175)  (TYR333)   [view usage] : c.26.1.5 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |ATP sulfurylase catalytic domain |ATP sulfurylase catalytic domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.26