Protein Concepts Dictionary

Tableau information

Concept source:  d2emra_  amino acid (a.a.) range (TYR117)(VAL263)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (TYR117)  (THR123) H1
	  (LYS132)  (TYR138) E2
	  (SER147)  (GLY159) H3
	  (LEU160)  (LEU166) E4
	  (ALA178)  (MET191) H5
	  (VAL203)  (ARG208) E6
	  (PRO214)  (GLY219) E7
	  (PRO233)  (VAL238) E8
	  (ILE244)  (GLY255) H9
	  (PRO257)  (VAL263) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2       97.2°   E2                                                             
H3      -51.5° -148.8°   H3                                                      
E4      119.5°  -31.9° -157.5°   E4                                               
H5      -90.6°   97.0°  -85.3°  116.7°   H5                                        
E6      118.4°  -76.2°  115.4°  -46.7°  150.6°   E6                                 
E7      -60.5°   94.6°  -71.7°  124.8°  -30.7°  170.7°   E7                          
E8      -63.0°  123.5°  -48.2°  152.1°  -37.9°  160.3°  -28.9°   E8                   
H9       84.7°  -34.7° -126.6°   35.6° -129.5°   55.4° -115.8° -140.5°   H9            
H10     -98.5°  153.7°   51.2° -141.9°   62.0° -113.7°   75.3°   49.0° -168.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2el3a_ :   (TYR117)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2e4nb_ :   (SER118)  (VAL265)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2hutb_ :   (SER118)  (VAL265)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2elda_ :   (TYR117)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2dv3a_ :   (TYR117)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2pckb_ :   (SER118)  (VAL265)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2pb5a_ :   (TYR117)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2ek7a_ :   (TYR117)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2egsa_ :   (SER118)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2p9da_ :   (TYR117)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2e8ha_ :   (TYR117)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2eh5a_ :   (TYR117)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2owua_ :   (SER118)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
 d2huva_ :   (TYR117)  (VAL263)   [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.90