Protein Concepts Dictionary

Tableau information

Concept source:  d1bx4a_  amino acid (a.a.) range (ASP43)(LEU152)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP43)   (LYS54) H1
	   (LYS57)   (ALA62) E2
	   (THR66)   (GLN78) H3
	   (ALA83)   (GLY88) E4
	   (ASP93)  (HIS107) H5
	  (ASP109)  (TYR113) E6
	  (GLY121)  (ILE127) E7
	  (ASP130)  (ALA139) E8
	  (ALA139)  (TYR144) H9
	  (LYS145)  (LEU152) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2     -116.4°   E2                                                             
H3      -54.3°   66.3°   H3                                                      
E4     -116.3° -117.8° -167.3°   E4                                               
H5       74.0°  -58.1°   24.6°  168.0°   H5                                        
E6     -125.6°  104.4° -162.7°  -13.6°  159.9°   E6                                 
E7       62.2°  135.7°  -85.4°   97.4°   81.8°  110.2°   E7                          
E8     -120.9°  -59.0°  109.3°  -67.0° -114.2°   54.5°  164.0°   E8                   
H9      134.1°   19.0°   81.1°  105.8°  -66.9°   93.4° -131.0°  -60.0°   H9            
H10      66.2°  -51.5°   16.3°  159.4°  -28.5°  148.3° -101.2°   93.9°  -67.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1bx4a_ :    (ASP43)  (LEU152)   [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Adenosine kinase |Human (Homo sapiens) [TaxId: 9606]
 d2pkka_ :    (ARG20)  (ALA135)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d2i6aa_ :    (LEU48)  (LEU152)   [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Adenosine kinase |Human (Homo sapiens) [TaxId: 9606]
 d3otxb_ :    (PHE48)  (SER151)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
 d2i6ba_ :    (GLU47)  (LEU152)   [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Adenosine kinase |Human (Homo sapiens) [TaxId: 9606]
 d2a9ya_ :    (ARG53)  (SER159)   [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Adenosine kinase |Toxoplasma gondii [TaxId: 5811]
 d3vaqb_ :    (ILE48)  (GLN151)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
 d4n08a_ :    (GLY46)  (GLU160)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Trypanosoma brucei [TaxId: 999953]
 d3uq6a_ :    (ILE48)  (GLN151)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.72