Protein Concepts Dictionary

Tableau information

Concept source:  d4o6ra_  amino acid (a.a.) range (ASP376)(ASN477)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP376)  (GLN380) H1
	  (PRO386)  (ARG392) E2
	  (SER395)  (ASN404) H3
	  (LEU410)  (TRP415) E4
	  (ASP418)  (ARG428) H5
	  (GLY432)  (ASN437) E6
	  (SER446)  (GLY452) E7
	  (TYR456)  (MET460) E8
	  (PHE462)  (TYR468) H9
	  (TYR468)  (ASN477) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2     -120.0°   E2                                                             
H3      -66.7°  144.3°   H3                                                      
E4      114.3°  -58.9°  155.0°   E4                                               
H5      -76.7°  115.4°  -29.0°  168.9°   H5                                        
E6      111.5°  -78.4°  134.5°  -20.4°  158.6°   E6                                 
E7     -126.8°   65.7°  -82.4°  111.7°   58.0° -120.8°   E7                          
E8       60.6° -114.2°   99.6°  -63.7° -125.9°   52.7°  172.1°   E8                   
H9      -68.1°  114.0°  -32.0°  172.8°  -10.4° -166.4°   63.3° -121.9°   H9            
E10      41.8°  -81.3°  -88.5°  108.8°  -78.3°  121.4°  -98.5°   89.1°  -68.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4i26a_ :   (ALA398)  (LYS499)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d4i26c_ :   (ALA398)  (ILE500)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d2onma_ :   (MET393)  (VAL493)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d4u3wa_ :   (ALA393)  (ARG494)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d4o6ra_ :   (ASP376)  (ASN477)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d2j6lb_ :   (GLY391)  (SER500)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ky8a_ :   (MET389)  (GLY494)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN |Thermoproteus tenax [TaxId: 2271]
 d3rhpa_ :   (GLU795)  (TYR902)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2id2a_ :   (MET371)  (VAL471)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Streptococcus mutans [TaxId: 1309]
 d2esda_ :   (MET371)  (VAL471)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Streptococcus mutans [TaxId: 1309]
 d1uxna_ :   (MET389)  (GLY494)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN |Thermoproteus tenax [TaxId: 2271]
 d4u3wb_ :   (ALA393)  (ARG494)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d2jg7a_ :   (ALA392)  (SER498)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Acanthopagrus schlegeli [TaxId: 72011]
 d2j6la_ :   (GLY391)  (SER500)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1uxva_ :   (MET389)  (GLY494)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN |Thermoproteus tenax [TaxId: 2271]
 d4i1wa_ :   (ALA398)  (LYS499)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d3rhma_ :   (GLU795)  (TYR902)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2id2c_ :   (MET371)  (VAL471)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Streptococcus mutans [TaxId: 1309]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.82