Protein Concepts Dictionary

Tableau information

Concept source:  d1aoga2  amino acid (a.a.) range (SER179)(ILE286)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER179)  (LEU185) H1
	  (ARG190)  (GLY196) E2
	  (PHE199)  (TYR211) H3
	  (ASP215)  (ARG223) E4
	  (ASP232)  (GLY247) H5
	  (GLY247)  (LYS253) E6
	  (LYS253)  (ALA263) E7
	  (GLY265)  (PHE271) E8
	  (GLY274)  (ASP280) E9
	  (ASP280)  (ILE286) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2     -157.9°   E2                                                             
H3       16.5° -168.6°   H3                                                      
E4     -172.4°  -15.1° -170.9°   E4                                               
H5       30.6° -171.1°   19.8° -156.1°   H5                                        
E6      161.7°  -39.4°  149.4°  -24.3° -131.8°   E6                                 
E7       49.2° -140.3°   50.0° -132.5°   35.1°  114.3°   E7                          
E8     -146.8°   39.0° -136.3°   36.4° -138.8°   44.1°  152.5°   E8                   
E9       37.5° -125.2°   53.6° -135.5°   60.4° -144.3°  -52.6°  154.5°   E9            
E10    -143.6°  -14.3°  156.6°  -29.2°  173.1°  -53.3° -141.4°   47.7°  112.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1xhca2 :   (THR121)  (GLY223)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |NADH oxidase /nitrite reductase |Pyrococcus furiosus [TaxId: 2261]
 d1hyua2 :   (ASP349)  (ILE449)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains |Salmonella typhimurium [TaxId: 90371]
 d1fl2a2 :   (CYS345)  (ILE449)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains |Escherichia coli [TaxId: 562]
 d1d7ya2 :   (THR131)  (GLY236)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |NADH-dependent ferredoxin reductase, BphA4 |Pseudomonas sp., KKS102 [TaxId: 306]
 d1feaa2 :   (SER177)  (ILE284)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Trypanothione reductase |Crithidia fasciculata [TaxId: 5656]
 d1bwca2 :   (THR176)  (ILE289)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Glutathione reductase |Human (Homo sapiens) [TaxId: 9606]
 d1typa2 :   (SER178)  (ILE285)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Trypanothione reductase |Crithidia fasciculata [TaxId: 5656]
 d1ndaa2 :   (SER178)  (ILE285)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Trypanothione reductase |Trypanosoma cruzi [TaxId: 5693]
 d2jk6a2 :   (SER178)  (ILE285)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Trypanothione reductase |Leishmania infantum [TaxId: 5671]
 d1jeha2 :   (SER172)  (VAL281)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Dihydrolipoamide dehydrogenase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1lpfa2 :   (ASP169)  (VAL274)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Dihydrolipoamide dehydrogenase |Pseudomonas fluorescens [TaxId: 294]
 d1ebda2 :   (ASP165)  (THR271)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Dihydrolipoamide dehydrogenase |Bacillus stearothermophilus [TaxId: 1422]
 d1gera2 :   (SER157)  (ILE261)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Glutathione reductase |Escherichia coli [TaxId: 562]
 d1aoga2 :   (SER179)  (ILE286)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Trypanothione reductase |Trypanosoma cruzi [TaxId: 5693]
 d3lada2 :   (SER170)  (GLY277)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Dihydrolipoamide dehydrogenase |Azotobacter vinelandii [TaxId: 354]
 d1lvla2 :   (SER161)  (ALA263)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Dihydrolipoamide dehydrogenase |Pseudomonas putida [TaxId: 303]
 d1cl0a2 :   (ASP139)  (ILE243)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Thioredoxin reductase |Escherichia coli [TaxId: 562]
 d1grha_ :   (THR176)  (ILE289)   [view usage] : i.12.1.1 |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Glutathione reductase |Human (Homo sapiens) [TaxId: 9606]
 d1h6va2 :   (SER180)  (VAL291)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Mammalian thioredoxin reductase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1gesa2 :   (SER157)  (TRP259)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Glutathione reductase |Escherichia coli [TaxId: 562]
 d1f6ma2 :   (ASP139)  (GLY244)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Thioredoxin reductase |Escherichia coli [TaxId: 562]
 d1f8wa2 :   (ARG134)  (VAL240)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |NADH peroxidase |Enterococcus faecalis [TaxId: 1351]
 d1m6ia2 :   (LYS286)  (VAL398)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Apoptosis-inducing factor (AIF) |Human (Homo sapiens) [TaxId: 9606]
 d1dxla2 :   (SER166)  (ALA275)   [view usage] : c.3.1.5 |FAD/NAD(P)-binding domain |FAD/NAD(P)-binding domain |FAD/NAD-linked reductases, N-terminal and central domains |Dihydrolipoamide dehydrogenase |Pea (Pisum sativum) [TaxId: 3888]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.3,    i.12