Protein Concepts Dictionary

Tableau information

Concept source:  d1aqja2  amino acid (a.a.) range (PRO259)(PRO360)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEHEEHHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO259)  (PHE264) H1
	  (ILE266)  (SER272) E2
	  (SER272)  (HIS278) H3
	  (GLY288)  (THR294) E4
	  (GLY311)  (PRO315) E5
	  (PRO315)  (ARG323) H6
	  (ARG323)  (THR328) H7
	  (HIS330)  (ALA334) E8
	  (VAL341)  (GLU347) E9
	  (GLU355)  (PRO360) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2       74.5°   E2                                                             
H3       17.7°  -58.9°   H3                                                      
E4     -155.9° -111.4° -163.2°   E4                                               
E5       37.1°  111.4°   52.7°  132.5°   E5                                        
H6     -109.6°  116.4°  122.6°  -46.4°   95.6°   H6                                 
H7       87.4° -107.5°  -85.1°  111.6°  -73.3° -135.6°   H7                          
E8     -146.4°  -73.8° -132.7°   39.9°  171.1°   75.5° -112.5°   E8                   
E9       16.3°   79.3°   21.3° -166.4°  -34.3° -122.0°  -71.2°  152.7°   E9            
E10      68.5°  142.9°   84.1°  103.5°  -31.5°  -79.4°   69.0°  142.9°  -64.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1aqia2 :   (PRO259)  (PRO360)   [view usage] : d.287.1.1 |DNA methylase specificity domain |DNA methylase specificity domain |TaqI C-terminal domain-like |DNA methylase TaqI, C-terminal domain |Thermus aquaticus [TaxId: 271]
 d1aqja2 :   (PRO259)  (PRO360)   [view usage] : d.287.1.1 |DNA methylase specificity domain |DNA methylase specificity domain |TaqI C-terminal domain-like |DNA methylase TaqI, C-terminal domain |Thermus aquaticus [TaxId: 271]
 d2ih5a2 :   (THR247)  (PRO360)   [view usage] : d.287.1.1 |DNA methylase specificity domain |DNA methylase specificity domain |TaqI C-terminal domain-like |DNA methylase TaqI, C-terminal domain |Thermus aquaticus [TaxId: 271]
 d2jg3a2 :   (PRO259)  (PRO360)   [view usage] : d.287.1.1 |DNA methylase specificity domain |DNA methylase specificity domain |TaqI C-terminal domain-like |automated matches |Thermus aquaticus [TaxId: 271]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.287