Protein Concepts Dictionary

Tableau information

Concept source:  d1sxra_  amino acid (a.a.) range (LEU16)(TRP170)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEHEEEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU16)   (GLY21) H1
	   (ARG36)   (HIS42) E2
	   (GLY50)   (ASP70) H3
	   (ASN77)   (ASN82) E4
	   (ILE85)   (THR90) E5
	  (GLY106)  (ILE112) E6
	  (SER121)  (GLN138) H7
	  (ASP144)  (ALA149) E8
	  (ALA149)  (ILE154) H9
	  (LEU161)  (TRP170) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2       17.8°   E2                                                             
H3     -101.9°  105.2°   H3                                                      
E4       55.1°  -44.5°  144.7°   E4                                               
E5     -108.6°  117.5°  -20.8°  161.8°   E5                                        
E6       29.3°  -21.9°  127.1°  -25.8°  137.6°   E6                                 
H7     -145.8°  162.5°  -65.4°  148.9°  -49.2°  160.9°   H7                          
E8      -29.0°  -21.9°   83.8°  -63.5°   98.3°  -43.7°  147.5°   E8                   
H9     -103.3° -104.9°    5.4° -141.8°   25.3° -126.8°   67.1°  -83.2°   H9            
H10     155.3°  152.0° -101.3°  107.5°  -90.5°  131.0°  -43.3° -165.1° -100.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2rkqa_ :    (THR16)  (TRP170)   [view usage] : d.118.1.0 |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1s2jb_ :    (LEU16)  (ILE167)   [view usage] : d.118.1.1 |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |Peptidoglycan-recognition protein-SA (Cg11709) |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1sxra_ :    (LEU16)  (TRP170)   [view usage] : d.118.1.1 |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |Peptidoglycan-recognition protein-SA (Cg11709) |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d2xz4a_ :    (ASP61)  (GLN214)   [view usage] : d.118.1.0 |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d2f2lx1 :   (LYS338)  (ILE490)   [view usage] : d.118.1.1 |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |Peptidoglycan-recognition protein-LC |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1ohta_ :    (SER17)  (ILE169)   [view usage] : d.118.1.1 |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |N-acetylmuramoyl-L-alanine amidase-like |Peptidoglycan recognition protein-lb (Cg14704) |Fruit fly (Drosophila melanogaster) [TaxId: 7227]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.118