Protein Concepts Dictionary

Tableau information

Concept source:  d1oipa2  amino acid (a.a.) range (ILE93)(ASN198)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEEHHHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE93)   (ALA98) H1
	  (TYR100)  (SER106) E2
	  (LYS113)  (ARG118) E3
	  (ARG118)  (ASP123) H4
	  (THR128)  (GLU146) H5
	  (GLU146)  (ARG151) H6
	  (LYS155)  (GLU161) E7
	  (PHE165)  (THR172) H8
	  (THR172)  (ASP185) H9
	  (PRO188)  (ASN198) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2      -70.6°   E2                                                             
E3       79.5°  149.6°   E3                                                      
H4      126.8°  145.4°   54.7°   H4                                               
H5      -87.6°  -18.6°  161.8°  128.3°   H5                                        
H6       79.0°   90.9°  -88.3° -120.0° -101.8°   H6                                 
E7       69.3°  139.4°  -10.3°  -63.3°  153.1°  -87.5°   E7                          
H8     -150.0°  -87.6°  122.2°   82.7°  -74.8°  -81.1° -132.0°   H8                   
H9      -82.7°  -12.2° -161.1°  136.3°    8.1°  -94.5° -151.0°   76.7°   H9            
E10      43.4°  114.0°  -36.1°  -88.2°  130.2°   80.4°  -26.0° -151.7° -126.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1oiza2 :    (ILE93)  (ASN198)   [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |Alpha-tocopherol transfer protein |Human (Homo sapiens) [TaxId: 9606]
 d3w68c2 :    (LEU93)  (ASN198)   [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3w67a2 :    (LEU93)  (GLY193)   [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1oipa2 :    (ILE93)  (ASN198)   [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |Alpha-tocopherol transfer protein |Human (Homo sapiens) [TaxId: 9606]
 d1r5la2 :    (ILE92)  (ASN198)   [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |Alpha-tocopherol transfer protein |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.13