Protein Concepts Dictionary

Tableau information

Concept source:  d1mdba_  amino acid (a.a.) range (THR26)(LEU148)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEEHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR26)   (LYS37) H1
	   (ALA43)   (GLY47) E2
	   (ASN48)   (SER52) E3
	   (SER52)   (GLY71) H4
	   (ASP76)   (GLN81) E5
	   (GLU87)   (GLY99) H6
	  (ALA100)  (LEU106) E7
	  (SER112)  (GLU122) H8
	  (ALA124)  (PRO129) E9
	  (TYR137)  (LEU148) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2      -83.8°   E2                                                             
E3      -99.2°  168.8°   E3                                                      
H4     -144.1°   88.0°  -83.2°   H4                                               
E5       65.6°   37.2° -153.5°  122.1°   E5                                        
H6     -122.0° -146.6°   25.2°  -58.7° -167.6°   H6                                 
E7       87.2°   40.5° -149.9°  108.6°  -22.5° -146.4°   E7                          
H8     -106.5° -153.3°   15.7°  -69.1°  168.7°   15.7°  159.7°   H8                   
E9       41.4°   50.1° -137.1°  137.4°  -24.3°  162.1°  -46.4°  147.5°   E9            
H10    -154.0°  114.1°   59.6°  -30.2°  139.8°  -34.8°  118.8°  -49.3°  163.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2vzea_ :    (PHE46)  (ILE164)   [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1mdba_ :    (THR26)  (LEU148)   [view usage] : e.23.1.1 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Dihydroxybenzoate-AMP ligase DhbE |Bacillus subtilis [TaxId: 1423]
 d3o82b_ :    (PRO29)  (ASN141)   [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 557601]
 d3o82a_ :    (PRO29)  (ASN151)   [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 557601]
 d3b7wa_ :    (PHE46)  (THR169)   [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4eata_ :    (ARG24)  (SER131)   [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
 d3u16b_ :    (PRO29)  (ASN141)   [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 557601]
 d3cw9a_ :     (THR3)  (GLY121)   [view usage] : e.23.1.1 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |4-chlorobenzoyl CoA ligase |Alcaligenes sp. AL3007 [TaxId: 206162]
 d2vzec_ :    (PHE46)  (ILE164)   [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3a9va_ :    (LEU32)  (LYS136)   [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Populus tomentosa [TaxId: 118781]
 d1md9a_ :    (THR26)  (SER146)   [view usage] : e.23.1.1 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Dihydroxybenzoate-AMP ligase DhbE |Bacillus subtilis [TaxId: 1423]
 d3o83b_ :    (PRO29)  (ASN141)   [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 557601]
 d3dlpx_ :     (THR3)  (SER120)   [view usage] : e.23.1.1 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |4-chlorobenzoyl CoA ligase |Alcaligenes sp. AL3007 [TaxId: 206162]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  e.23