Protein Concepts Dictionary

Tableau information

Concept source:  d3k8xc1  amino acid (a.a.) range (VAL1702)(SER1808)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEEHEEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	 (VAL1702) (ASP1721) H1
	 (PHE1723) (VAL1728) E2
	 (CYS1730) (GLY1734) E3
	 (GLY1734) (GLN1744) H4
	 (ARG1745) (GLU1750) E5
	 (GLY1751) (ILE1755) E6
	 (GLY1758) (GLY1767) H7
	 (GLY1779) (GLY1787) H8
	 (HIS1790) (VAL1794) E9
	 (ASP1796) (SER1808) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2     -132.4°   E2                                                             
E3     -109.7° -105.0°   E3                                                      
H4      -14.9° -145.7°  -95.9°   H4                                               
E5      118.1°  -16.3° -120.8° -132.4°   E5                                        
E6     -112.0°  109.1°   12.8°  -97.2° -125.4°   E6                                 
H7     -119.6°  -70.3°   41.6° -113.0°  -83.6°   52.4°   H7                          
H8      -41.7° -157.3°   69.1°  -27.1° -153.6°   70.2°   94.0°   H8                   
E9      107.4°  -42.6° -142.5°  121.6°  -30.7°  139.7° -112.9° -148.3°   E9            
H10      42.0°  168.5°   73.3°   27.4°  159.8°  -71.7°  103.1°   11.5°  142.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4asia1 :  (GLY1830) (SER1937)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1od4c1 :  (VAL1702) (SER1808)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3iava1 :   (VAL150)  (LEU258)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Streptomyces coelicolor [TaxId: 1902]
 d1od4a1 :  (VAL1702) (SER1808)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1uyrb1 :  (VAL1702) (SER1808)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4asie1 :  (PRO1831) (SER1937)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1uysa1 :  (ALA1712) (SER1808)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1vrga1 :   (ALA155)  (SER245)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Propionyl-CoA carboxylase complex B subunit, PccB |Thermotoga maritima [TaxId: 2336]
 d3k8xc1 :  (VAL1702) (SER1808)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1od2a1 :  (VAL1702) (SER1808)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1xnva1 :   (ALA166)  (LEU258)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Propionyl-CoA carboxylase complex B subunit, PccB |Streptomyces coelicolor [TaxId: 1902]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14