Protein Concepts Dictionary

Tableau information

Concept source:  d2z3jc_  amino acid (a.a.) range (SER4)(PRO123)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEEHEEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER4)   (ILE21) H1
	   (SER28)   (LEU34) E2
	   (ARG39)   (PHE49) E3
	   (ALA55)   (ALA67) H4
	   (GLY69)   (CYS73) E5
	   (CYS73)   (GLY78) E6
	   (GLY89)  (PRO100) H7
	  (GLY101)  (ILE105) E8
	  (PRO113)  (GLY117) E9
	  (GLY117)  (PRO123) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2      149.0°   E2                                                             
E3      -46.1°  150.0°   E3                                                      
H4      108.4°  -40.7°  134.0°   H4                                               
E5      -93.3°  112.8°  -81.6°  144.1°   E5                                        
E6      -31.9°  166.6°  -43.4°  136.9°  -61.5°   E6                                 
H7      131.8°  -18.1°  142.4°   24.0° -130.3°  160.6°   H7                          
E8      -61.4°  134.8°  -72.2°  136.3°   36.1°  -33.7°  144.9°   E8                   
E9      112.0°  -59.0°   92.3°  -59.1° -138.1°  133.8°  -51.3°  163.5°   E9            
H10     -69.6° -134.9°  -25.1° -146.6°   67.5°   56.2° -139.0°   73.6°   89.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2z3jc_ :     (SER4)  (PRO123)   [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |automated matches |Aspergillus terreus [TaxId: 33178]
 d2z3ia_ :     (GLN5)  (PRO123)   [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |automated matches |Aspergillus terreus [TaxId: 33178]
 d2z3ha_ :     (SER4)  (PRO123)   [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |automated matches |Aspergillus terreus [TaxId: 33178]
 d1wn5a1 :     (SER4)  (PRO123)   [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |Blasticidin-S deaminase |Aspergillus terreus [TaxId: 33178]
 d3oj6a_ :     (SER7)  (PRO125)   [view usage] : c.97.1.0 |Cytidine deaminase-like |Cytidine deaminase-like |automated matches |automated matches |Fungus (Coccidioides immitis) [TaxId: 5501]
 d1wn6a_ :     (SER4)  (LEU122)   [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |automated matches |Aspergillus terreus [TaxId: 33178]
 d2z3ja_ :     (SER4)  (PRO123)   [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |automated matches |Aspergillus terreus [TaxId: 33178]
 d1wn6b_ :     (SER4)  (PRO123)   [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |automated matches |Aspergillus terreus [TaxId: 33178]
 d2z3gb_ :     (SER4)  (PRO123)   [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |automated matches |Aspergillus terreus [TaxId: 33178]
 d2z3ga_ :     (SER4)  (PRO123)   [view usage] : c.97.1.1 |Cytidine deaminase-like |Cytidine deaminase-like |Cytidine deaminase |automated matches |Aspergillus terreus [TaxId: 33178]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.97