Protein Concepts Dictionary

Tableau information

Concept source:  d2wpis_  amino acid (a.a.) range (ASP125)(LYS241)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEEHEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP125)  (PHE133) H1
	  (SER135)  (TRP141) E2
	  (LEU155)  (ARG165) E3
	  (ARG165)  (SER171) H4
	  (ASN179)  (PHE184) E5
	  (HIS199)  (GLU204) E6
	  (GLY205)  (LEU209) E7
	  (ILE212)  (GLU217) E8
	  (GLY223)  (THR229) E9
	  (VAL235)  (LYS241) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2      -92.6°   E2                                                             
E3      -95.6°  138.9°   E3                                                      
H4       74.7°  -43.2°  101.1°   H4                                               
E5       19.8°  -88.5°  111.0°   84.5°   E5                                        
E6       88.2°  127.4°  -93.1°  158.7°   75.5°   E6                                 
E7     -113.2°  -68.4°   71.4°  -47.2° -128.9°  154.2°   E7                          
E8      -47.5°  -81.5°   75.0°   41.2°  -65.7°  131.0°   66.2°   E8                   
E9      161.6°   82.1°  -99.9° -111.5°  141.9°  -81.2°  -81.3°  147.1°   E9            
H10     128.3°   49.9°  136.1°   90.3° -112.3°  -90.4°   87.3°  130.9°   37.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2wphs_ :   (ASP125)  (LYS241)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2wpms_ :   (ASP125)  (LYS241)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2wpis_ :   (ASP125)  (LYS241)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor IXa, protease domain |Human (Homo sapiens) [TaxId: 9606]
 d3kcgh_ :   (LYS126)  (LYS241)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor IXa, protease domain |Human (Homo sapiens) [TaxId: 9606]
 d1kigh_ :   (ALA130)  (MET242)   [view usage] : b.47.1.2 |Trypsin-like serine proteases |Trypsin-like serine proteases |Eukaryotic proteases |Coagulation factor Xa, protease domain |Cow (Bos taurus) [TaxId: 9913]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47