Protein Concepts Dictionary

Tableau information

Concept source:  d2qazb_  amino acid (a.a.) range (TYR13)(SER122)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEEHEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TYR13)   (ALA33) H1
	   (PRO41)   (THR47) E2
	   (GLY54)   (PRO58) E3
	   (PRO58)   (LYS64) H4
	   (ASP67)   (VAL72) E5
	   (TRP78)   (GLU84) E6
	   (THR85)   (THR90) E7
	   (LYS98)  (PRO103) E8
	  (ARG109)  (SER114) E9
	  (PHE117)  (SER122) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2     -131.4°   E2                                                             
E3       47.6° -106.2°   E3                                                      
H4      137.1°  -81.5°  103.6°   H4                                               
E5       43.2°  170.4°   75.6°  107.5°   E5                                        
E6     -140.7°   59.5°  165.7°  -75.8° -118.4°   E6                                 
E7       38.9° -114.8°    9.6°  108.2°   66.4°  172.9°   E7                          
E8     -145.4°   67.9° -166.5°  -64.1° -112.4°  -14.4°  171.9°   E8                   
E9       52.3°  167.4°   66.9°   89.9°  -21.6° -127.2°   59.3° -116.4°   E9            
E10    -126.4°   -9.9° -109.3°  -89.9°  160.6°   56.6° -117.0°   67.0° -176.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2nysb_ :     (TYR8)  (ASP117)   [view usage] : b.136.1.2 |SspB-like |SspB-like |AGR_C_3712p-like |Uncharacterized protein AGR_C_3712p |Agrobacterium tumefaciens [TaxId: 358]
 d2qaza_ :    (TYR13)  (SER122)   [view usage] : b.136.1.0 |SspB-like |SspB-like |automated matches |automated matches |Caulobacter vibrioides [TaxId: 155892]
 d2nysa1 :     (TYR8)  (ASP117)   [view usage] : b.136.1.2 |SspB-like |SspB-like |AGR_C_3712p-like |Uncharacterized protein AGR_C_3712p |Agrobacterium tumefaciens [TaxId: 358]
 d2qazd_ :    (GLY23)  (SER122)   [view usage] : b.136.1.0 |SspB-like |SspB-like |automated matches |automated matches |Caulobacter vibrioides [TaxId: 155892]
 d2qazb_ :    (TYR13)  (SER122)   [view usage] : b.136.1.0 |SspB-like |SspB-like |automated matches |automated matches |Caulobacter vibrioides [TaxId: 155892]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 b.136