Protein Concepts Dictionary

Tableau information

Concept source:  d4e3ib_  amino acid (a.a.) range (ILE16)(LYS183)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEEEHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE16)   (GLN22) H1
	   (PRO26)   (GLN35) E2
	   (TYR39)   (GLY44) E3
	   (THR58)   (GLY63) E4
	   (GLY63)   (GLY81) H5
	   (ALA98)  (ILE104) H6
	  (THR105)  (THR111) H7
	  (SER127)  (ASN137) H8
	  (ALA151)  (GLY167) H9
	  (SER169)  (LYS183) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2      155.9°   E2                                                             
E3      -24.8°  174.3°   E3                                                      
E4       68.5°  -87.8°   91.2°   E4                                               
H5      121.9°   43.3° -141.6°  -75.5°   H5                                        
H6      165.2°  -30.6°  146.3°  111.1°  -70.8°   H6                                 
H7       77.0° -121.4°   54.7°  121.3° -159.9°   91.7°   H7                          
H8       92.0°  -70.1°  105.9°   37.8°  -85.5°   80.9°  101.6°   H8                   
H9     -117.5°   63.5° -122.1° -105.7°   35.8°  -77.1° -132.4° -121.3°   H9            
H10    -148.9°   52.1° -125.4°  129.3°   89.0°   21.9°  -71.9°   94.1°   84.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ga0a_ :     (SER4)  (LYS183)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Enterobacter cloacae, P99, cephalosporinase [TaxId: 550]
 d2wzza_ :    (GLN43)  (GLU202)   [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d1fr1a_ :     (THR4)  (LYS183)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Citrobacter freundii [TaxId: 546]
 d4hefa_ :    (PRO30)  (GLU202)   [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d3iwqb_ :     (GLN6)  (LYS183)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d2dnsc_ :     (LEU4)  (GLY182)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |D-Amino acid amidase DaaA |Ochrobactrum anthropi [TaxId: 529]
 d2efuc_ :     (LEU4)  (GLY182)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |D-Amino acid amidase DaaA |Ochrobactrum anthropi [TaxId: 529]
 d1i5qb_ :    (ILE16)  (LYS183)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d3gqzb_ :     (GLN7)  (LYS183)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d4gzba_ :     (ALA3)  (GLU176)   [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.3