Protein Concepts Dictionary

Tableau information

Concept source:  d1xtfa_  amino acid (a.a.) range (ASN15)(GLU148)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEEEHHHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN15)   (ALA20) H1
	   (ALA20)   (ASN26) E2
	   (LYS34)   (HIS39) E3
	   (LYS41)   (PRO46) E4
	   (ASN53)   (GLY57) H5
	   (THR80)  (SER100) H6
	  (THR101)  (GLY114) H7
	  (THR125)  (VAL129) E8
	  (ASN133)  (ILE138) E9
	  (SER143)  (GLU148) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2      -50.5°   E2                                                             
E3       98.8°   92.0°   E3                                                      
E4      -62.3°  -97.7°  142.6°   E4                                               
H5       88.0° -113.6°  150.8°   26.2°   H5                                        
H6       88.5°   80.4°  -12.2°  140.5°  157.7°   H6                                 
H7      114.1°   70.5° -111.0°  106.3°  -91.5° -110.0°   H7                          
E8       81.3° -125.8°  122.3°   29.7°   30.4° -127.3° -121.4°   E8                   
E9      125.9°  137.4° -126.7°   63.7°  -38.0° -138.9°  -78.3°   51.6°   E9            
E10     -63.1°  -67.3°   35.8° -117.9°  142.3°   25.6°  121.4°  116.0°  155.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2isea_ :    (ASN15)  (ASN150)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
 d3bwia_ :    (ASN15)  (GLU148)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
 d4ej5a_ :    (ASN15)  (GLU148)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
 d4ks6a_ :    (ASN15)  (GLU148)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
 d1xtga_ :    (ASN15)  (ASN150)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]
 d4el4a_ :    (ASN15)  (GLU148)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |automated matches |Clostridium botulinum [TaxId: 1491]
 d1xtfa_ :    (ASN15)  (GLU148)   [view usage] : d.92.1.7 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Clostridium neurotoxins, catalytic domain |Botulinum neurotoxin |Clostridium botulinum, serotype A [TaxId: 1491]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.92