Protein Concepts Dictionary

Tableau information

Concept source:  d1i1la_  amino acid (a.a.) range (SER172)(GLY294)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEEEHEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER172)  (GLY178) H1
	  (GLN180)  (ASP186) E2
	  (ASN198)  (VAL202) E3
	  (VAL206)  (PRO210) E4
	  (GLY219)  (GLY233) H5
	  (GLY233)  (GLN239) E6
	  (GLU244)  (ALA249) H7
	  (ASP250)  (GLY256) E8
	  (GLU260)  (SER266) E9
	  (PRO279)  (GLY294) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2      139.6°   E2                                                             
E3       62.2°  -92.2°   E3                                                      
E4      118.8°   69.4°  151.9°   E4                                               
H5       79.0°  -90.5°   26.0° -159.5°   H5                                        
E6      108.9°  -56.5°  121.8°  -30.2° -138.6°   E6                                 
H7      -57.1°  129.8°   49.9° -157.1°   40.4°  165.4°   H7                          
E8     -122.1°   93.5°  158.5°  -48.1°  133.1°  -78.2° -112.3°   E8                   
E9       52.3°  -88.0°  -57.1°   99.9°  -82.9°   72.6°  -93.7°  143.9°   E9            
H10    -113.6°  106.6°  125.4°  -81.3°  101.4° -111.0°  -80.9°  -33.3° -164.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1a0ga_ :   (LEU150)  (ILE276)   [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase |Bacillus sp., strain YM-1 [TaxId: 1409]
 d3u0gf_ :   (ALA162)  (GLY295)   [view usage] : e.17.1.0 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
 d1daaa_ :   (LEU150)  (ILE276)   [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase |Bacillus sp., strain YM-1 [TaxId: 1409]
 d2eiyb_ :   (VAL160)  (VAL291)   [view usage] : e.17.1.0 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d3lqsa_ :   (LEU150)  (ILE276)   [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase |Bacillus sp., strain YM-1 [TaxId: 1409]
 d1i1la_ :   (SER172)  (GLY294)   [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |Branched-chain aminoacid aminotransferase |Escherichia coli [TaxId: 562]
 d1g2wa_ :   (LEU149)  (ILE276)   [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase |Bacillus stearothermophilus [TaxId: 1422]
 d1wrvb_ :   (VAL160)  (VAL291)   [view usage] : e.17.1.0 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |automated matches |automated matches |Thermus thermophilus [TaxId: 274]
 d1a0gb_ :   (LEU150)  (ILE276)   [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase |Bacillus sp., strain YM-1 [TaxId: 1409]
 d5daaa_ :   (LEU149)  (ILE276)   [view usage] : e.17.1.1 |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase-like PLP-dependent enzymes |D-aminoacid aminotransferase |Bacillus sp., strain YM-1 [TaxId: 1409]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  e.17