Protein Concepts Dictionary

Tableau information

Concept source:  d4gkhh_  amino acid (a.a.) range (LEU19)(PRO140)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEEEHEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LEU19)   (TYR24) H1
	   (ALA29)   (GLY34) E2
	   (THR39)   (TYR44) E3
	   (ASN48)   (GLY59) E4
	   (GLY59)   (TRP74) H5
	   (LYS85)   (PRO91) E6
	   (ASP92)   (THR98) E7
	  (THR105)  (GLU112) H8
	  (GLY117)  (SER133) H9
	  (PRO135)  (PRO140) H10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2      105.2°   E2                                                             
E3       42.6°  133.1°   E3                                                      
E4     -139.7°  -55.9°  170.9°   E4                                               
H5       73.8°   95.5°  -49.7° -136.8°   H5                                        
E6     -141.5°  -69.7°  157.1°  -13.8° -143.4°   E6                                 
E7       38.6°  105.0°  -28.1°  160.9°   35.3° -174.7°   E7                          
H8      -22.3°   82.9°  -61.6°  123.2°  -77.2°  130.5°  -46.9°   H8                   
H9      156.0°  -87.6°  114.3°  -64.2°   85.0°  -61.8°  118.9°  158.9°   H9            
H10    -112.3° -121.8°  104.2°  -66.7°  136.4°  -53.1°  132.1°  125.2°   75.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4gkhc_ :    (LEU19)  (PRO140)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Acinetobacter baumannii [TaxId: 509173]
 d4gkib_ :    (ASN18)  (PRO140)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Acinetobacter baumannii [TaxId: 509173]
 d4gkil_ :    (LEU19)  (PRO140)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Acinetobacter baumannii [TaxId: 509173]
 d4ej7a_ :    (LEU19)  (SER133)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Acinetobacter baumannii [TaxId: 509173]
 d2bkkc_ :     (SER7)  (ASN149)   [view usage] : d.144.1.6 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |APH phosphotransferases |Type IIIa 3',5"-aminoglycoside phosphotransferase |Enterococcus faecalis [TaxId: 1351]
 d4gkhe_ :    (ASN18)  (PRO140)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Acinetobacter baumannii [TaxId: 509173]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.144