Protein Concepts Dictionary

Tableau information

Concept source:  d1ndba1  amino acid (a.a.) range (ASN171)(GLN291)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEEEEHHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN171)  (ILE176) H1
	  (CYS180)  (PRO185) E2
	  (GLN187)  (PHE193) E3
	  (ILE203)  (ASN208) E4
	  (TYR209)  (TYR217) E5
	  (THR225)  (SER240) H6
	  (PRO247)  (SER253) H7
	  (ARG256)  (LYS268) H8
	  (LYS270)  (SER282) H9
	  (THR285)  (GLN291) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2       78.1°   E2                                                             
E3       89.4°  152.7°   E3                                                      
E4       48.6°   68.4°  120.2°   E4                                               
E5     -119.5° -136.6°  -34.9°  153.9°   E5                                        
H6       42.3°   40.4°  131.6°  -35.0°  156.0°   H6                                 
H7      140.2°   63.3° -129.7° -104.4°   96.4°  -98.1°   H7                          
H8       51.6° -101.8°   52.5°   99.9°  -70.9°   86.1° -143.2°   H8                   
H9      144.8° -131.2°  -70.8° -117.2°   56.3° -147.5°  -68.8° -122.6°   H9            
E10      56.8°   89.2°  104.2°  -21.7°  134.2°  -56.3° -110.6°  102.2°  -99.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ndba1 :   (ASN171)  (GLN291)   [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Carnitine acetyltransferase |Mouse (Mus musculus) [TaxId: 10090]
 d1ndfa1 :   (ASN171)  (LEU288)   [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Carnitine acetyltransferase |Mouse (Mus musculus) [TaxId: 10090]
 d1q6xa1 :   (MET162)  (LEU282)   [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Choline O-acetyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1t1ua1 :   (LYS163)  (GLY288)   [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Choline O-acetyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2h3pa1 :   (ASN171)  (GLN291)   [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Carnitine acetyltransferase |Mouse (Mus musculus) [TaxId: 10090]
 d1nm8a1 :   (ASN150)  (ARG273)   [view usage] : c.43.1.3 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |Choline/Carnitine O-acyltransferase |Carnitine acetyltransferase |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.43