Protein Concepts Dictionary

Tableau information

Concept source:  d4luma_  amino acid (a.a.) range (ASP36)(PRO153)

nSSEs in this Concept: 10

String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP36)   (LYS46) H1
	   (LYS46)   (GLU60) E2
	   (GLY64)   (TYR74) E3
	   (LYS86)   (HIS90) E4
	   (ARG95)  (ALA101) E5
	  (LYS105)  (THR112) E6
	  (ASP116)  (SER121) E7
	  (GLY125)  (PRO131) E8
	  (ALA135)  (ASN140) E9
	  (GLU144)  (PRO153) E10

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                    
E2      -88.1°   E2                                                             
E3       81.0°  161.6°   E3                                                      
E4     -107.9°  -21.3° -168.9°   E4                                               
E5       62.1°  121.1°  -40.5°  137.7°   E5                                        
E6     -131.7°  -70.4°  127.7°  -51.0° -164.6°   E6                                 
E7       46.3°   94.6°  -67.2°  113.9°  -28.0°  164.9°   E7                          
E8     -125.8°  -73.6°  124.8°  -55.6°  164.9°    7.8° -166.9°   E8                   
E9       58.2°  126.4°  -35.4°  144.7°    8.7°  163.1°  -31.8°  159.7°   E9            
E10    -103.1°  -28.5°  169.8°   16.4°  149.5°  -42.9°  122.4°  -45.3°  154.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ltaa_ :    (GLU37)  (PRO153)   [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |automated matches |Pyrococcus furiosus [TaxId: 186497]
 d1j3pb_ :    (GLU38)  (PRO154)   [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |Glucose-6-phosphate isomerase, GPI |Thermococcus litoralis [TaxId: 2265]
 d4luma_ :    (ASP36)  (PRO153)   [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |automated matches |Pyrococcus furiosus [TaxId: 186497]
 d1j3pa_ :    (ASP37)  (PRO154)   [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |Glucose-6-phosphate isomerase, GPI |Thermococcus litoralis [TaxId: 2265]
 d1j3rb_ :    (ASP37)  (PRO154)   [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |Glucose-6-phosphate isomerase, GPI |Thermococcus litoralis [TaxId: 2265]
 d2gc0a_ :    (ASP36)  (PRO153)   [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |Glucose-6-phosphate isomerase, GPI |Pyrococcus furiosus [TaxId: 2261]
 d1qxja_ :    (ASP36)  (PRO153)   [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |Glucose-6-phosphate isomerase, GPI |Pyrococcus furiosus [TaxId: 2261]
 d1x7na_ :    (GLU37)  (PRO153)   [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |Glucose-6-phosphate isomerase, GPI |Pyrococcus furiosus [TaxId: 2261]
 d3sxwa_ :    (ASP38)  (PRO155)   [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |automated matches |Pyrococcus furiosus [TaxId: 186497]
 d4lula_ :    (ASP36)  (PRO153)   [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |automated matches |Pyrococcus furiosus [TaxId: 186497]
 d4luka_ :    (ASP36)  (PRO153)   [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |automated matches |Pyrococcus furiosus [TaxId: 186497]
 d1x82a_ :    (ASP36)  (PRO153)   [view usage] : b.82.1.7 |Double-stranded beta-helix |RmlC-like cupins |Glucose-6-phosphate isomerase, GPI |Glucose-6-phosphate isomerase, GPI |Pyrococcus furiosus [TaxId: 2261]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.82